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Prikvačeni tweet
Proud to introduce
@janeliaflyem "hemibrain"#hemibrain: a connectome of the Drosophila central brain. https://www.biorxiv.org/content/10.1101/2020.01.21.911859v1 ….@stardazed0@michalj Please see overview website: https://www.janelia.org/project-team/flyem/hemibrain … Play with data on neuPrint: https://neuprint.janelia.org/Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
For part of Jan 22nd, there was an error in the exported adjacency files (CSVs), which could affect some analyses. Please re-download at http://storage.googleapis.com/hemibrain/v1.0/conn_summary.tgz …
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We will hopefully re-export a minor revision soon to fix a few of the more database-related issues ("v1.0.1"). The next larger revision, "v1.1", which will reflect some improvements to the underlying reconstruction, is not for a few months.
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We are maintaining a list of known
#hemibrain issues that are mostly straightforward to address: https://docs.google.com/document/d/1vae3ClHR8z8uekqwrOHtqiux3oY5-Y_xw6W2srCi3PI/edit?usp=sharing … A couple technical details in the following thread...Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Stephen Plaza proslijedio/la je Tweet
It took both remarkable human and artificial intelligence to construct the most detailed map of a
#brain to date https://www.biorxiv.org/content/10.1101/2020.01.21.911859v1 … a herculean effort!@HHMIJanelia@GoogleAI@stardazed0@michalj@stephenplaza@janeliaflyem https://www.economist.com/science-and-technology/2020/01/25/the-biggest-most-detailed-map-yet-made-of-brain-cells …@TheEconomistpic.twitter.com/rGmakL6SvQ
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next steps:
@janeliaflyem and various collaborating labs will submit several#hemibrain papers in the next several weeks. Reconstruction revisions (hopefully minor) to v1.0 by around April. Currently ramping up to reconstruct the CNS...pic.twitter.com/rXK6j2jPkK
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In an avalanche of tweets, I forget to shout-out the integral work of the Hess lab: Shan Xu and
@KennethHayworth truly ground-breaking fib-sem datahttps://youtu.be/I9cTwWYDrREHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Stephen Plaza proslijedio/la je Tweet
I recommend checking out the "mushroom body" interactive link! Grateful for this collaboration with
@HHMIJanelia and hope the resource proves useful for the community.https://twitter.com/GoogleAI/status/1220058143507353601 …Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Here is a link for all data we inject into neuPrint in CSV format. If you want everything that goes into neuPrint (sans the 3d data and skeletons), download from here: https://storage.cloud.google.com/hemibrain-release/neuprint/hemibrain_v1.0_neo4j_inputs.zip …
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Stephen Plaza proslijedio/la je Tweet
The feat by researchers at
#Google and Howard Hughes Medical Institute amounts to a big “told you so” to skeptics who said it couldn’t be done this soon, this inexpensively, or this well.https://buff.ly/30IrwXMHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
For people that are interesting in bulk downloading data ... it is best not to do this through the interactive UI in neuPrint. Please consult https://dvid.io for more details. We will also provide a big directory of all the skeleton morphologies soon as well.
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Stephen Plaza proslijedio/la je Tweet
Proud to introduce
@janeliaflyem "hemibrain"#hemibrain: a connectome of the Drosophila central brain. https://www.biorxiv.org/content/10.1101/2020.01.21.911859v1 ….@stardazed0@michalj Please see overview website: https://www.janelia.org/project-team/flyem/hemibrain … Play with data on neuPrint: https://neuprint.janelia.org/Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
We tried to make the best dataset possible but this is "v1.0". We will have a new revision in a few months. Feel free to make comments and add annotations to the dataset using neuroglancer.https://youtu.be/n2cwzaSO9I0
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But let's say you don't care about flies and just like big graphs. Here is a compact 26TB->25MB data model reduction containing the adjacency matrix. We annotate brain region information for each connection to make the model richer. https://storage.googleapis.com/hemibrain/v1.0/conn_summary.tgz …
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We are hoping that non-fly people will fall in love with flies! Here are some of our favorite neurons!https://youtu.be/_zRmXj5YVpU
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For new neuPrint users ... you will need to login with any google email credential. Tutorials and instructions in the 'i' section. Tutorial here: https://youtu.be/1JDgMHVJH9g Other questions or issues today:https://groups.google.com/forum/#!forum/neuprint …
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Many thanks to large proofreader effort led by Pat Rivlin and Ruchi Parekh. Incredible software and algorithm group
@garybhuang@wtkatz, Stuart Berg,@philiphubbard , Lowell Umayam,@neomorphic , Tom Dolafi, Don Olbris,@_zhaot , Rob Svirskas ... and many others!Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Takes a large team effort: thanks Janelia,
@janeliaflyem, Connectomics Group at Google@stardazed0@michalj ,@herrsaalfeld and many others. Team Science!!pic.twitter.com/ROtYDrVl61
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