Tweetovi
- Tweetovi, trenutna stranica.
- Tweetovi i odgovori
- Medijski sadržaj
Blokirali ste korisnika/cu @slowkow
Jeste li sigurni da želite vidjeti te tweetove? Time nećete deblokirati korisnika/cu @slowkow
-
Prikvačeni tweet
TNF and IL-17A synergistically activate IL-6 and other cytokines. But what factors mediate this synergy? In our latest
#research article, we show CUX1 and IκBζ (NFKBIZ) are key mediators of response to TNF and IL-17A in human synovial fibroblasts.
https://doi.org/10.1101/571315 pic.twitter.com/qTHBlTxO5t
Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Kamil Slowikowski proslijedio/la je Tweet
(1/7) EXCITED to share our latest work on “Mapping heritability of obesity by brain cell types”
@ptimshel went through 727 cell types and identified 22 neuronal cell types enriching for obesity#gwas SNPs@cbmrhttps://www.biorxiv.org/content/10.1101/2020.01.27.920033v1 …Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Kamil Slowikowski proslijedio/la je Tweet
Check this out: it's Bowtie2 running in the browser using WebAssembly!

This is still preliminary (I disabled SIMD and threads) but I'd like to figure out how this could be useful as a sandbox on the web; ideas are welcome! #bioinformatics#webassembly cc@BenLangmeadpic.twitter.com/63iR55ikArHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
1. Record violin music
2. Input violin music
into a neural network
and train it to reconstruct the violin music
3. Input human voice
into the neural network
4. Network outputs violin music
with timbre from human voice
Cool!
https://storage.googleapis.com/ddsp/index.html https://twitter.com/jesseengel/status/1217566052139167744 …
Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Kamil Slowikowski proslijedio/la je Tweet
Check out my latest blog post
#bioinformatics tutorial + tips on#RNAvelocity analysis (in situ) using sample#singlecell data from our latest@PNASNews paper on 10k gene#spatialtranscriptomics by#MERFISH https://jef.works/blog/2020/01/14/rna_velocity_analysis_tutorial_tips/ …#Rstats#rTutorial#DataScience#transcriptomicspic.twitter.com/CCWni1IFyV
Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
After profiling the code and making a few small changes, harmonypy version 0.0.3 should be just as fast as the original R package. Surprisingly, numba did not seem to speed things up. I might try more speedups again in the future with Cython.
Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Kamil Slowikowski proslijedio/la je Tweet
What healthcare must learn from the aviation industry: a cautionary and timely tale of the consequences of rushing things via self- and pre-certification in industries where consumer safety is critical: https://www.scientificamerican.com/article/artificial-intelligence-is-rushing-into-patient-care-and-could-raise-risks/ … 1/n
Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
I ported the Harmony algorithm from R/C++ to Python:
https://github.com/slowkow/harmonypy …
So far, the results seem to be concordant with the original version, but the run time is about 5 times slower.
#python#numpy#bioinformatics#rstats#rcpphttps://twitter.com/soumya_boston/status/1196583423894265856 …
Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Kamil Slowikowski proslijedio/la je Tweet
This is what it’s all about. And yet, basically no one has even seen these figures. We need to communicate this everywhere over and over again. Let’s get started.https://twitter.com/Peters_Glen/status/1205449629527166976 …
0:24Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Kamil Slowikowski proslijedio/la je Tweet
Excited to share our newly published method we call Probe-Seq! With it, you can easily isolate (potentially) any cell type from (potentially) any organism and perform cell type specific bulk RNA-Seq! We used mouse, human, Drosophila, and chick as a proof of concept.
@eLifepic.twitter.com/7dOP2SX3p9
Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Kamil Slowikowski proslijedio/la je Tweet
Vega-Lite 4 is out!
New interactive features (including interactive legends), new transforms (density, regression, quantiles), responsive size, gradient fill, image marks, multiline text + more features / bug fixes. More details and screenshots: https://github.com/vega/vega-lite/releases/tag/v4.0.0 …. (1/5)Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Harmony in motion, inspired by
@coletrapnell#threejs https://twitter.com/slowkow/status/1196626497383129088 …pic.twitter.com/FEkpmev74kHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Kamil Slowikowski proslijedio/la je Tweet
Extremely excited to announce sci-Plex, described in a new paper out today https://science.sciencemag.org/content/early/2019/12/04/science.aax6234 …! Joint work with
@JShendure lab, led by a crack team:@SRsrivatsan,@joselmcfaline, and@vram142. With sci-Plex, we can profile expression in single cells from thousands of samples.Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Excited to see how
#webassembly will lower the barrier to entry for#bioinformatics We will not need to download, compile, and run commands in the terminal. Instead, run *the same code* (samtools, seqtk, etc. thanks to@lh3lh3) with a helpful user interface in the web browserhttps://twitter.com/RobAboukhalil/status/1153362711075381250 …
Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Kamil Slowikowski proslijedio/la je Tweet
We (with Aviv Regev) want to share with you our preprint scPhere(https://www.biorxiv.org/content/10.1101/853457v1?rss=1 …), a deep generative model embedding of single-cell RNA-Seq profiles on hyperspheres and hyperbolic spaces
@humancellatlaspic.twitter.com/KpI7uicn13Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Let's see Harmony in motion!
Animated alignment of @10xGenomics#singlecell#RNAseq data: 3,500 cells (PBMC) from 3 donors. How to make this animation: https://slowkow.com/notes/harmony-animation … Paper: https://doi.org/dfcg#bioinformatics#rstats#gganimate#ggplot2#datavis#datascience https://twitter.com/soumya_boston/status/1196583423894265856 …pic.twitter.com/oiFvYMbxofHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Informative comparison of nuclear and whole cell transcriptomes by Trygve Bakken et al. from
@AllenInstitute I am impressed that the code is available and nicely organized: https://github.com/AllenInstitute/NucCellTypes … https://twitter.com/LGMartelotto/status/1195341366408237056 …pic.twitter.com/Cz0v23gDOD
Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
So cool to see a blockchain approach for caching and reusing intermediate results between workflows
The cache can be shared -- for everyone in your group, institute, or computing environment
#blockchain#bioinformatics#science#python https://twitter.com/johanneskoester/status/1195378097815785472 …pic.twitter.com/0XKCk05buQ
Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Kamil Slowikowski proslijedio/la je Tweet
New work with
@keurcien,@mblum_g,@John_J_McGrath and@bvilhjal available in preprint! We present some PCA-related analyses (mostly in the@uk_biobank), some pitfalls associated with these analyses, and (very) efficient implementations of solutions. --> thread 1/nhttps://twitter.com/biorxiv_genetic/status/1195054871034105857 …Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Kamil Slowikowski proslijedio/la je Tweet
I'm going to start a thread of companies & execs not understanding that algorithms can still be biased on variables that are not inputs. Machine learning is great at finding latent variables.https://twitter.com/math_rachel/status/1191064500834750464?s=19 …
Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Incredible work! This helps me to understand tax rates. Lots of wonderful details to explore in this app
Designed by a team of talented students!
https://twitter.com/gabriel_zucman/status/1183744168813907969 …
Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi
Čini se da učitavanje traje već neko vrijeme.
Twitter je možda preopterećen ili ima kratkotrajnih poteškoća u radu. Pokušajte ponovno ili potražite dodatne informacije u odjeljku Status Twittera.
Blog:
Examples:
Colab:
Code:
Paper: