Fun paper by Vladimir Schur @jesvedberg @pamedina10 @RussCorbett and @ras_nielsen!https://twitter.com/biorxiv_genomic/status/1158469126932877314 …
That is perhaps one way to look at it. Conditional on a high current frequency and an old introgression event, the paths with highest probabilities are paths where the increase in allele frequency is recent. 1/2
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With a recent increase there is less chance of back-recombination to the introgressed haplotype background. Hence, the tracts will be shorter. 2/2
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