A few months ago I realised you have to use Cython to calc pairwise dists for big data in Python, so I wrote my own:https://github.com/oliviaguest/pdist …
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If you need it, like some needed my Python gini https://github.com/oliviaguest/gini … — let me know. It's nice to know when ppl find something useful.

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For more context on gini, see: http://neuroplausible.com/gini Can't say much about why I wrote pdist yet... but soon!
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