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o_guest's profile
Olivia Guest | Ολίβια Γκεστ
Olivia Guest | Ολίβια Γκεστ
Olivia Guest | Ολίβια Γκεστ
@o_guest

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Olivia Guest | Ολίβια Γκεστ

@o_guest

• goth gremlin • computational cognitive/neuroscience modeling • geek & techish Cypriot • plant aficionada • came up with #bropenscience • http://neuroplausible.com  •

Τότεναμ, Λονδίνο & Cyprus
olivia.science
Joined October 2015

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    1. Olivia Guest | Ολίβια Γκεστ‏ @o_guest 6 Apr 2017
      • Report Tweet
      Replying to @o_guest @draxus @seaandsailor

      OK, so I don't actually understand your way, sorry. You have to bear in mind I used multiprocessing for the first time yesterday. ☺️

      1 reply 0 retweets 0 likes
    2. Olivia Guest | Ολίβια Γκεστ‏ @o_guest 6 Apr 2017
      • Report Tweet
      Replying to @o_guest @draxus @seaandsailor

      for example where you define your arguments why are you using itertools.product?

      1 reply 0 retweets 0 likes
    3. Olivia Guest | Ολίβια Γκεστ‏ @o_guest 6 Apr 2017
      • Report Tweet
      Replying to @o_guest @draxus @seaandsailor

      does that mean I have to use itertools.combinations? my loop is outside all this... hmm...

      2 replies 0 retweets 0 likes
    4. Manuel Martín‏ @draxus 6 Apr 2017
      • Report Tweet
      Replying to @o_guest @seaandsailor

      my point is that you don't need to use the loop. I use itertools because I want all combinations of lists A and B.

      1 reply 0 retweets 1 like
    5. Manuel Martín‏ @draxus 6 Apr 2017
      • Report Tweet
      Replying to @draxus @o_guest @seaandsailor

      map will take care of splitting your array of arguments and combine the results for you.

      1 reply 0 retweets 1 like
    6. Olivia Guest | Ολίβια Γκεστ‏ @o_guest 6 Apr 2017
      • Report Tweet
      Replying to @draxus @seaandsailor

      oh I see OK lemme try again

      1 reply 0 retweets 0 likes
    7. Olivia Guest | Ολίβια Γκεστ‏ @o_guest 6 Apr 2017
      • Report Tweet
      Replying to @o_guest @draxus @seaandsailor

      sorry I don't get how to use combinations to get what I want into a single array — and then the function has to accept the whole array?

      2 replies 0 retweets 0 likes
    8. Manuel Martín‏ @draxus 6 Apr 2017
      • Report Tweet
      Replying to @o_guest @seaandsailor

      nop. In your case you actually need something like: results = mp.starmap(calculate_pairwise_distance, combinations(X,X)).

      2 replies 0 retweets 0 likes
    9. Manuel Martín‏ @draxus 6 Apr 2017
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      Replying to @draxus @o_guest @seaandsailor

      or why not use n_jobs param of http://scikit-learn.org/stable/modules/generated/sklearn.metrics.pairwise.pairwise_distances.html … ?

      1 reply 0 retweets 0 likes
    10. Olivia Guest | Ολίβια Γκεστ‏ @o_guest 6 Apr 2017
      • Report Tweet
      Replying to @draxus @seaandsailor

      because I only started working using these libraries literally yesterday so I'm a n00b OK I'll try that too feels a bit anti-educational to

      1 reply 0 retweets 0 likes
      Olivia Guest | Ολίβια Γκεστ‏ @o_guest 6 Apr 2017
      • Report Tweet
      Replying to @o_guest @draxus @seaandsailor

      be just trying random stuff without learning what I am trying exactly but I'll give that a go...

      3:09 AM - 6 Apr 2017
      2 replies 0 retweets 0 likes
        1. New conversation
        2. Olivia Guest | Ολίβια Γκεστ‏ @o_guest 6 Apr 2017
          • Report Tweet
          Replying to @o_guest @draxus @seaandsailor

          hang on it's just another pairwise distance calculator that will certainly run out of memory... I need around 50 million data points!!

          1 reply 0 retweets 0 likes
        3. Olivia Guest | Ολίβια Γκεστ‏ @o_guest 6 Apr 2017
          • Report Tweet
          Replying to @o_guest @draxus @seaandsailor

          yep memory error 🙁

          1 reply 0 retweets 0 likes
        4. 3 more replies
        1. New conversation
        2. Manuel Martín‏ @draxus 6 Apr 2017
          • Report Tweet
          Replying to @o_guest @seaandsailor

          that's what I usually do as well. Try random stuff and when it's not working I read the documentation lol

          1 reply 0 retweets 1 like
        3. Olivia Guest | Ολίβια Γκεστ‏ @o_guest 6 Apr 2017
          • Report Tweet
          Replying to @draxus @seaandsailor

          I respect that I do it too but this was a little too far as it's like you telling me the random stuff over twitter — a lot of nuance lost 😅

          0 replies 0 retweets 0 likes
        4. End of conversation

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