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Replying to @o_guest
Map reducable? Or do you need to retain context for all-vs-all at all times?
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Replying to @froggleston
I have been given a solution that samples the distances and this does the job — I do not (yet) understand the code very much.
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Replying to @o_guest @froggleston
I understood enough to pluck from where it was, fix the globals (naughty naughty), and use it on dummy data & compare w pdist.
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Replying to @o_guest @froggleston
It's v obv sampling using a step, but it possibly can cope w step = 1 (i.e., sample all) as it's written with multiprocessing.
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Replying to @o_guest @froggleston
The solution exists because I have taken over the coding bit of project from previous coder/pd.
8:55 AM - 22 Feb 2017
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