Oxford NanoporeOvjeren akaunt

@nanopore

Nanopores for direct DNA/RNA analysis: MinION, PromethION, GridION, VolTRAX. Products are for Research Use Only. Metrichor Ltd for applied.

Oxford, UK
Vrijeme pridruživanja: svibanj 2009.

Tweetovi

Blokirali ste korisnika/cu @nanopore

Jeste li sigurni da želite vidjeti te tweetove? Time nećete deblokirati korisnika/cu @nanopore

  1. Prikvačeni tweet

    Towards real-time targeting/enrichment/other sampling on the sequencer, not in the sample prep: two new preprints from Kovaka/Payne show adaptive sampling using ‘Read Until’ API, find out more here: 1/3

    Prikaži ovu nit
    Poništi
  2. proslijedio/la je Tweet
    prije 2 sata
    Odgovor korisnicima i sljedećem broju korisnika:

    Yeah - you simply reverse the voltage over the specific pore.

    Poništi
  3. proslijedio/la je Tweet
    prije 5 sati
    Odgovor korisnicima i sljedećem broju korisnika:

    Early testing of rat whole chromosome “selection”. Different surface zones on a single flowcell used for different Chrm selection/rejection. (Median read lengths per chromosome) 😉. Looking forward to some finer grain target region stuff on a basic GPU enabled desktop/laptop!

    Poništi
  4. proslijedio/la je Tweet
    prije 7 sati

    And thanks to for hooking us up with some cell lines to help show that we can detect a PML-RARA fusion in a tumour cell line with only 15 hours sequencing using the cancer panel (717 genes).

    Prikaži ovu nit
    Poništi
  5. proslijedio/la je Tweet
    prije 6 sati

    .'s write up on how adaptive sequencing works by controlling pore voltages in real time. Amazing that we can have so much control over individual molecules of DNA!

    Poništi
  6. proslijedio/la je Tweet
    prije 5 sati
    Odgovor korisnicima i sljedećem broju korisnika:

    Yes, coverage over target region has little to no bias and follows a Poisson distribution exactly as expected.

    Poništi
  7. proslijedio/la je Tweet
    prije 5 sati

    Worth noting all of this worked with compute available on board the GridION mk1 alone. No additional compute required. Also early results working with tell us an NVIDIA RTC2080 can keep up fine with typical mammal genome sized search spaces.

    Prikaži ovu nit
    Poništi
  8. proslijedio/la je Tweet
    prije 6 sati

    Introducing "Targeted nanopore sequencing by real-time mapping of raw electrical signal with UNCALLED" with et al. Does selective enrichment and depletion of any targeted genomic region purely in software for sequencing.

    Prikaži ovu nit
    Poništi
  9. proslijedio/la je Tweet
    prije 7 sati

    Read Until to enrich >700 genes to mean 30x coverage on single flowcell. Custom panels (up to 25,600 targets so far) as easy as providing a coordinate file. Read more at - thanks to , and team.

    Prikaži ovu nit
    Poništi
  10. Payne et al. target a human exome panel covering over 10,000 genes, enrich from a mixed sample, COSMIC 717-gene panel including fusion event, using adaptive sampling 3/3

    Prikaži ovu nit
    Poništi
  11. Kovaka et al. enrich for 148 human genes associated with hereditary cancers to 30X coverage on a single MinION flow cell 2/3

    Prikaži ovu nit
    Poništi
  12. Reminder! Vania Costa's knowledge exchange, titled 'a primer on nucleic acid extraction', will be taking place tomorrow @ 3pm in the Community! Find out more here: (login required)

    Poništi
  13. proslijedio/la je Tweet

    Our paper using sequencing for rapid in-country genomic surveillance of virus has just been published ! This was a huge effort from many people across 4 countries 🇹🇿🇰🇪🇵🇭over 3years, thanks to all involved! Please RT!

    Prikaži ovu nit
    Poništi
  14. proslijedio/la je Tweet
    prije 13 sati

    Siadjeu et al. providing insights into the yam genome using reads. The assembly consisted of 35,269 protein-encoding genes with a total length of 485 Mbp. bioRxiv viewer

    Poništi
  15. proslijedio/la je Tweet
    prije 13 sati

    Very fruitful collaboration between and : sequencing of yam DNA, assembly of genome sequence & annotation. About 6 months from first meeting with to .

    Prikaži ovu nit
    Poništi
  16. proslijedio/la je Tweet
    prije 16 sati

    'High contiguity de novo genome sequence assembly of Trifoliate yam (Dioscorea dumetorum) using long read sequencing'

    , , i još njih 5
    Prikaži ovu nit
    Poništi
  17. proslijedio/la je Tweet
    prije 12 sati

    Totally fascinated by the DNA tech from ! Wish we had it for our expeditions to French Guiana and Polynesia ! I loved filming DNA seq in a Montenegro cave with & team

    Poništi
  18. A Nanopore Day is taking place in New Delhi, India on 19th February! Check out the full agenda and apply for a place here:

    Poništi
  19. proslijedio/la je Tweet
    2. velj

    Multitasking on the GridION. Flongles working alongside the MinION flowcells! Crazy how small the Flongles are.

    Poništi
  20. proslijedio/la je Tweet
    1. velj

    We scanned the Salmonella WGS collection for mobile colistin resistance genes and used to describe four novel MCR encoding plasmids and several chromosomal integration events

    Poništi

Čini se da učitavanje traje već neko vrijeme.

Twitter je možda preopterećen ili ima kratkotrajnih poteškoća u radu. Pokušajte ponovno ili potražite dodatne informacije u odjeljku Status Twittera.

    Možda bi vam se svidjelo i ovo:

    ·