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margrietpalm's profile
Margriet Palm
Margriet Palm
Margriet Palm
@margrietpalm

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Margriet Palm

@margrietpalm

Computational biologist at #LACDR @UniLeiden (previously @INRIA, @CWInl), fascinated by biology, crazy about python and loves music.

Amsterdam, North Holland
Joined November 2009

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    Margriet Palm‏ @margrietpalm Jun 15

    @wdeback is the windows binary for Morpheus at https://imc.zih.tu-dresden.de/wiki/morpheus/doku.php?id=download:download … the most recent one?

    12:43 am - 15 Jun 2017
    2 replies . 0 retweets 0 likes
      1. New conversation
      2. Walter de Back‏ @wdeback Jun 15
        Replying to @margrietpalm

        Updated Windows binaries for Morpheus are now available. Have fun! https://imc.zih.tu-dresden.de/morpheus/packages/windows/public/morpheus-1.9.Windows.b170615.exe …

        1 reply . 0 retweets 2 likes
      3. Margriet Palm‏ @margrietpalm Jun 19
        Replying to @wdeback

        Binary is working fine and seems to 10 to 30% faster. However, cpm+2D diffusion is still about a factor 10 faster on linux.

        0 replies . 0 retweets 0 likes
      4. End of conversation
      1. New conversation
      2. Walter de Back‏ @wdeback Jun 15
        Replying to @margrietpalm

        No, it's not. Latest Linux/OSX binaries date from 05.05.17, but Windows version lacks behind (latest 02.11.16): https://imc.zih.tu-dresden.de/morpheus/packages/ …

        1 reply . 0 retweets 0 likes
      3. Walter de Back‏ @wdeback Jun 15
        Replying to @wdeback @margrietpalm

        Thanks for the comment. We'll update the Windows binary.

        1 reply . 0 retweets 0 likes
      4. Walter de Back‏ @wdeback Jun 15
        Replying to @wdeback @margrietpalm

        However, due to lack of compiler-level optimizations, performance of the Windows version is noticeably lower. I strongly advice Linux/Mac.

        2 replies . 0 retweets 0 likes
      5. Margriet Palm‏ @margrietpalm Jun 15
        Replying to @wdeback

        I just noticed that; factor 10 for a simulation with diffusion on 300x300 grid :'(.

        0 replies . 0 retweets 0 likes
      6. End of conversation

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