To work around the inconsistencies, the `kb` wrapper for kallisto and bustools can easily generate genome consistent transcriptomes.https://pypi.org/project/kb-python/ …
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We're not the only ones to stumble into this: https://twitter.com/KVittingSeerup/status/1029018660374044672 … Would be great if
@ensembl included the code used to make the various files distributed. Maybe they exist at https://github.com/Ensembl but couldn't find them. cc@PaulFlicekPrikaži ovu nit
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We're having discussions internally about how we can better serve the community working with pseudo-aligners. Thanks to you and
@KVittingSeerup for bringing this to our attentionHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi
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Did you check the GENCODE files as well? From the other thread, it sounds like those are consistent.
Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi
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Terrifying. Thanks for this!
Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi
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