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A nice overview of some of the technology advances in single-cell RNA-seq in 2019 presented by
@satijalab.https://www.youtube.com/watch?v=b9bqKulMLp8 … -
Me: Blah blah probability distribution blah blah blah. Prospective visiting graduate student: Sometimes it helps to think out of the simplex. Me:pic.twitter.com/pv3oYCQFOE
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I've been asking people to stop using Tophat for some time now but it continues to be heavily used. I recently learned of one reason why that is the case. Thanks for nothing
@illumina. https://www.illumina.com/techniques/sequencing/rna-sequencing.html …pic.twitter.com/41mft0lSvD
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And no. Geo Pertea did not "write a lot of the code". The plot attached shows exactly how much code he wrote (in fact an auxiliary script). It's true that he helped out on the Q&A email list (which I set up, organized and managed for years), and I've always appreciated that.pic.twitter.com/4FhuBmdeuo
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In a direct comparison of kallisto and Salmon they find that they are highly concordant with each other, but that kallisto is faster and uses less memory.pic.twitter.com/F2SQUgfGLE
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Dansleikur by Icelandic sculptor Þorbjörg Pálsdóttir. Photos taken 17 years apart.pic.twitter.com/jhz7Eo8BAY
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But in recent years the bar has been raised to 0.9998. As methods continue to improve in the next decade we'll increasingly have to come face-to-face with one of the great foundational "unsolved" problems in the field (is 0.999999... = 1 ??) 2/2 https://onlinelibrary.wiley.com/doi/full/10.1111/jgh.14941 …pic.twitter.com/3cYyHLC0DP
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I used to think it's impressive when a machine learning method performs at ROC AUC = 0.999. 1/2 https://link.springer.com/article/10.1007/s10278-019-00226-y …pic.twitter.com/LX2IOLURyQ
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The value of reproducibility and usability have been repeatedly demonstrated. There are numerous examples showing that usability directly accelerates science https://youtu.be/48wfaeg6MU0?t=1916 … 5/19
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Icelandic math problem: maximize alcohol volume subject to:pic.twitter.com/s3tVRTFfUa
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Price of this avocado in
#sanfrancisco is $9.89, approximately the salary a fruit picker earns in an hour.pic.twitter.com/Z5DWrQHMnQ
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Nosepods to go along with airpods. Beautiful facial accessories for several hundred $$. I'm wondering though... what do these Stanford thought leaders have in store for sticking in the mouth? https://www.avabreathe.com/pages/about pic.twitter.com/mCsBLmEI16
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