Lior Pachter

@lpachter

Bren Professor of Computational Biology at Caltech. Blog at .

Vrijeme pridruživanja: travanj 2009.

Medijski sadržaj

  1. 4. velj
    Odgovor korisnicima
  2. 4. velj

    A nice overview of some of the technology advances in single-cell RNA-seq in 2019 presented by .

  3. 3. velj
    Odgovor korisniku/ci
  4. 1. velj

    Me: Blah blah probability distribution blah blah blah. Prospective visiting graduate student: Sometimes it helps to think out of the simplex. Me:

  5. 26. sij

    I've been asking people to stop using Tophat for some time now but it continues to be heavily used. I recently learned of one reason why that is the case. Thanks for nothing .

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  6. 26. sij
    Odgovor korisnicima i sljedećem broju korisnika:

    And no. Geo Pertea did not "write a lot of the code". The plot attached shows exactly how much code he wrote (in fact an auxiliary script). It's true that he helped out on the Q&A email list (which I set up, organized and managed for years), and I've always appreciated that.

  7. 24. sij
    Odgovor korisniku/ci
  8. 19. sij
    Odgovor korisniku/ci
  9. 18. sij
  10. 10. sij

    In a direct comparison of kallisto and Salmon they find that they are highly concordant with each other, but that kallisto is faster and uses less memory.

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  11. 4. sij

    Dansleikur by Icelandic sculptor Þorbjörg Pálsdóttir. Photos taken 17 years apart.

  12. 1. sij
  13. 31. pro 2019.

    But in recent years the bar has been raised to 0.9998. As methods continue to improve in the next decade we'll increasingly have to come face-to-face with one of the great foundational "unsolved" problems in the field (is 0.999999... = 1 ??) 2/2

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  14. 31. pro 2019.

    I used to think it's impressive when a machine learning method performs at ROC AUC = 0.999. 1/2

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  15. 26. pro 2019.
    Odgovor korisnicima i sljedećem broju korisnika:

    Yesterday afternoon.

  16. 24. pro 2019.

    The value of reproducibility and usability have been repeatedly demonstrated. There are numerous examples showing that usability directly accelerates science 5/19

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  17. 23. pro 2019.

    Icelandic math problem: maximize alcohol volume subject to:

  18. 21. pro 2019.

    Price of this avocado in is $9.89, approximately the salary a fruit picker earns in an hour.

  19. 20. pro 2019.

    Nosepods to go along with airpods. Beautiful facial accessories for several hundred $$. I'm wondering though... what do these Stanford thought leaders have in store for sticking in the mouth?

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  20. 20. pro 2019.

    Linear regression. I kid you not. Here is the main claim:

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