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Prikvačeni tweet
A lot of talk about sequencing and tracking the
#2019nCoV epidemic. If you're interested in learning how this all works, we recently wrote a large(ish) review on genomic epidemiology. Link: https://www.ncbi.nlm.nih.gov/pubmed/30546099 Get it here: https://andersen-lab.com/papers/grubaugh-et-al-nat-microbiol-2019/ …pic.twitter.com/6POeuUeKkq
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Kristian G. Andersen proslijedio/la je Tweet
Here are my latest graphs of
#nCov case and fatality counts from globalcitizen's aggregated data. The doubling time of case counts has increased to about 6 days. But be aware that labs might reach testing capacity limits in the most affected areas. [1/6]pic.twitter.com/PtxeJfRxjk
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Kristian G. Andersen proslijedio/la je Tweet
There’s been a lot of chatter about whether masks protect against
#nCoV2019. Difficult fact: If you can’t get them, it doesn’t matter. Most of the world’s masks are made in China, and that could disrupt healthcare worldwide.https://www.wired.com/story/amid-coronavirus-fears-a-mask-shortage-could-spread-globally/ …Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Here's my analysis for today - take *every single* base in
#2019nCoV and blast each base *individually* against nt. Then I'll tally up the totals to give me (1) the exact animal this came from, and (2) any evidence of recombination/mutation. What could possibly go wrong?Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Kristian G. Andersen proslijedio/la je Tweet
1/8 The 12th Summer Institute for Statistics and Modeling in Infectious Diseases (
#SISMID) is scheduled for July 13-29, 2020. https://www.biostat.washington.edu/suminst/sismid However, currently we have no funding. We need to find core funding by early March or it will be cancelled.Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Kristian G. Andersen proslijedio/la je Tweet
I think that it’s about time that we had The Talk about the role of bioRxiv during outbreaks. Some of this is so far out that individually they wont impact much, but collectively they are shaping the narrative. We wanted real-time results, but it comes with an accuracy trade-off.https://twitter.com/rhyshparry/status/1224629553487679488 …
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Kristian G. Andersen proslijedio/la je Tweet
So, that paper we all reported on showing transmission of
#2019nCoV from an “asymptomatic case”? Well, it turns out the woman did have symptoms. Here’s what we know so far:https://www.sciencemag.org/news/2020/02/paper-non-symptomatic-patient-transmitting-coronavirus-wrong …Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Kristian G. Andersen proslijedio/la je Tweet
Obviously we have all got a bit distracted lately but Virus Genomics and Evolution 2020 (15-17 June) is open for registration:…https://coursesandconferences.wellcomegenomecampus.org/our-events/virus-genomics-and-evolution-2020/ …
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Kristian G. Andersen proslijedio/la je Tweet
Epidemics are mirrors that reflect the society they affect. I wrote about what the new coronavirus, 2019-nCoV, tells us about the world as it stands in 2020--the pace of modern science, the threat of fake news, the growth of isolationism, and all the rest.https://www.theatlantic.com/science/archive/2020/02/coronavirus-very-2020-epidemic/605941/ …
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This is a pretty interesting tidbit from the most recent
@WHO report on#2019nCoV. Not surprising - kinda sad, but definitely necessary. The R0 of misinformation is massively higher than the R0 of the virus. https://www.who.int/docs/default-source/coronaviruse/situation-reports/20200202-sitrep-13-ncov-v3.pdf?sfvrsn=195f4010_2 …pic.twitter.com/jq7nJUxnvu
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Note, the scientific response has been absolutely stellar in my opinion, so it's important not to mix it all up.
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Two good articles describing some of the critical issues that 'hampered' the early response to
#2019nCoV. https://www.nytimes.com/2020/02/01/world/asia/china-coronavirus.html?smid=tw-nytimesscience&smtyp=cur …https://www.washingtonpost.com/world/2020/02/01/early-missteps-state-secrecy-china-likely-allowed-coronavirus-spread-farther-faster/ …Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Kristian G. Andersen proslijedio/la je TweetHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi
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So in case you were wondering - the
@biorxivpreprint is far from broken and it's transforming our ability to accelerate scientific findings - some
, many
. Just take a look at all of the *amazing* science already published on a virus we didn't know existed a month ago. 

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And finally these two describing how this thing is spreading. https://www.biorxiv.org/content/10.1101/2020.01.23.917351v1 … https://www.biorxiv.org/content/10.1101/2020.01.25.919787v1 …pic.twitter.com/1kAGui1E1T
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Oh yeah, ACE2 really IS the receptor - same as SARS-CoV. Turns out TMPRSS2 is involved too. https://www.biorxiv.org/content/10.1101/2020.01.31.929042v1 …pic.twitter.com/OG1UkdKIK1
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So how long does it take to figure out what the receptor is? Hmmm, about a week... Yikes. https://www.biorxiv.org/content/10.1101/2020.01.22.915660v1 …pic.twitter.com/D2URIgIHxP
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Oh hey, these folks sequenced and released the first sequence allowing for the development of diagnostics. https://www.biorxiv.org/content/10.1101/2020.01.24.919183v1 …pic.twitter.com/efLi0FQxSl
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This one describing a bunch of things about the virus and outbreak. https://www.biorxiv.org/content/10.1101/2020.01.22.914952v2 …pic.twitter.com/so5hBHa07j
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While the Twittersphere has been freaking out about snake flu and HIV-corona mutant viruses

, if you're interested in learning more about #2019nCoV may I suggest you instead read these six *amazing*@biorxivpreprint's. Published only in the last week!
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Kristian G. Andersen proslijedio/la je Tweet
These short inserts do indeed exist in
#nCoV2019 relative to its closest sequenced relative (BetaCoV/bat/Yunnan/RaTG13/2013, seen here https://nextstrain.org/groups/blab/sars-like-cov …). However, a simple BLAST of such short sequences shows match to a huge variety of organisms. No reason to conclude HIV. https://twitter.com/biorxivpreprint/status/1223245639296978951 …pic.twitter.com/mUfxwB6GsP
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