Kristian G. Andersen

@K_G_Andersen

Infectious diseases & genomics. Immunologist in (voluntary) exile. Sarcasm score of 0.01. Fierce HOA (Hater of Acronyms).

La Jolla, CA
Vrijeme pridruživanja: studeni 2014.

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  1. Prikvačeni tweet
    30. sij

    A lot of talk about sequencing and tracking the epidemic. If you're interested in learning how this all works, we recently wrote a large(ish) review on genomic epidemiology. Link: Get it here:

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  2. proslijedio/la je Tweet
    prije 16 sati

    Here are my latest graphs of case and fatality counts from globalcitizen's aggregated data. The doubling time of case counts has increased to about 6 days. But be aware that labs might reach testing capacity limits in the most affected areas. [1/6]

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  3. proslijedio/la je Tweet

    There’s been a lot of chatter about whether masks protect against . Difficult fact: If you can’t get them, it doesn’t matter. Most of the world’s masks are made in China, and that could disrupt healthcare worldwide.

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  4. Here's my analysis for today - take *every single* base in and blast each base *individually* against nt. Then I'll tally up the totals to give me (1) the exact animal this came from, and (2) any evidence of recombination/mutation. What could possibly go wrong?

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  5. proslijedio/la je Tweet
    3. velj

    1/8 The 12th Summer Institute for Statistics and Modeling in Infectious Diseases () is scheduled for July 13-29, 2020. However, currently we have no funding. We need to find core funding by early March or it will be cancelled.

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  6. proslijedio/la je Tweet

    I think that it’s about time that we had The Talk about the role of bioRxiv during outbreaks. Some of this is so far out that individually they wont impact much, but collectively they are shaping the narrative. We wanted real-time results, but it comes with an accuracy trade-off.

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  7. proslijedio/la je Tweet
    3. velj

    So, that paper we all reported on showing transmission of from an “asymptomatic case”? Well, it turns out the woman did have symptoms. Here’s what we know so far:

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  8. proslijedio/la je Tweet

    Obviously we have all got a bit distracted lately but Virus Genomics and Evolution 2020 (15-17 June) is open for registration:

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  9. proslijedio/la je Tweet
    3. velj

    Epidemics are mirrors that reflect the society they affect. I wrote about what the new coronavirus, 2019-nCoV, tells us about the world as it stands in 2020--the pace of modern science, the threat of fake news, the growth of isolationism, and all the rest.

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  10. 2. velj

    This is a pretty interesting tidbit from the most recent report on . Not surprising - kinda sad, but definitely necessary. The R0 of misinformation is massively higher than the R0 of the virus.

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  11. 2. velj

    Note, the scientific response has been absolutely stellar in my opinion, so it's important not to mix it all up.

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  12. 2. velj
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  13. proslijedio/la je Tweet
    1. velj
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  14. 1. velj

    So in case you were wondering - the is far from broken and it's transforming our ability to accelerate scientific findings - some 💩, many 🌟. Just take a look at all of the *amazing* science already published on a virus we didn't know existed a month ago. 👍👏🍺

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  15. 1. velj
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  16. 1. velj

    Oh yeah, ACE2 really IS the receptor - same as SARS-CoV. Turns out TMPRSS2 is involved too.

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  17. 1. velj

    So how long does it take to figure out what the receptor is? Hmmm, about a week... Yikes.

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  18. 1. velj

    Oh hey, these folks sequenced and released the first sequence allowing for the development of diagnostics.

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  19. 1. velj

    This one describing a bunch of things about the virus and outbreak.

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  20. 1. velj

    While the Twittersphere has been freaking out about snake flu and HIV-corona mutant viruses 👽🦠, if you're interested in learning more about may I suggest you instead read these six *amazing* 's. Published only in the last week! 👇👇

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  21. proslijedio/la je Tweet
    31. sij

    These short inserts do indeed exist in relative to its closest sequenced relative (BetaCoV/bat/Yunnan/RaTG13/2013, seen here ). However, a simple BLAST of such short sequences shows match to a huge variety of organisms. No reason to conclude HIV.

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