Yufeng Shen

@joshuas

Computational biology and human genetics. Associate Professor at Columbia University

New York, NY
Vrijeme pridruživanja: siječanj 2007.

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  1. Prikvačeni tweet
    7. lis 2018.

    I'm looking for new postdocs in two areas: 1. interpretation of whole genome sequencing in disease genetic studies: 2. modeling of T cell clonal dynamic in development, organ transplantation and other conditions: Pls RT.

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  2. proslijedio/la je Tweet
    10. lis 2019.
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  3. proslijedio/la je Tweet
    12. ožu 2019.

    Registration is open for our new 2-day Functional Genomics bootcamp in June! eQTLs, ASE, GTEx, etc taught by myself, and ; keynote by . Coordinated by but open for all. Join us!

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  4. proslijedio/la je Tweet
    15. velj 2019.

    Our analysis of whole exome sequence data for 2572 group 1 PAH patients enrolled in the PAH Biobank is now available. We’ve identified 2 novel risk genes KLK1 and GGCX and confirmed several recently reported novel risk genes. Largest cohort ever sequenced.

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  5. proslijedio/la je Tweet
    3. velj 2019.

    Dana-Farber Cancer Institute (DFCI) () is looking for Lead Computational Biologist to build Cancer Immunologic Data Commons (CIDC). Please help RT.

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  6. proslijedio/la je Tweet
    10. sij 2019.

    Pilot study that genetically characterized 457 families enrolled in provides evidence for novel ASD genes:

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  7. proslijedio/la je Tweet
    4. sij 2019.
    Odgovor korisnicima

    Why do people continue using GWAS tag SNPs listed in GWAS databases without accounting for LD as 'positives' for training variant scoring models. They are very rarely the true causal SNPs. Can someone tell me what I'm missing????

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  8. proslijedio/la je Tweet
    11. pro 2018.
    Odgovor korisniku/ci

    Thank you for your support! I won -- with the most votes of all four candidates (for two seats). Swearing in was last night. One scientist down, hundreds to go! I'm glad to advise on how to get elected for local public office. :-)

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  9. proslijedio/la je Tweet
    3. pro 2018.

    Happy Hanukkah from !!! ‘Hanukkiat Haematopoesah’ Scientific consultant Jewish tradition consultant Artwork

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  10. proslijedio/la je Tweet
    28. stu 2018.

    My husband just asked me “what’s with all of the TIE fighters” on my graphs 😂

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  11. proslijedio/la je Tweet
    18. lis 2018.

    I'm hiring Research Scientists for my new Machine Learning group ! If you're interested in working on developing ML methods for impactful problems in drug discovery, then please apply or DM:

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  12. proslijedio/la je Tweet
    11. lis 2018.
    Odgovor korisnicima i sljedećem broju korisnika:

    My general philosophy is: try best to reduce the dependency on hardware, OS, libraries, compilers and other software. Not always possible of course, but a target to think about.

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  13. 8. kol 2018.
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  14. proslijedio/la je Tweet
    8. kol 2018.

    Pathway and network analysis of more than 2,500 whole cancer genomes

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  15. proslijedio/la je Tweet
    4. kol 2018.

    Please RT. I am recruiting PhD students, postdocs, staff scientists to join my new group at , . Please send me email if interested. Thx!

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  16. proslijedio/la je Tweet
    2. kol 2018.

    Our single-cell ATAC-seq atlas of mouse chromatin accessibility is out today With , led by and . 13 organs, 85 cell types, a CNN with Basset, cis-regulatory maps from Cicero, and more. Data here:

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  17. proslijedio/la je Tweet
    19. srp 2018.

    This is very sound advice. But I'd like to encourage applied data scientists to learn about deep learning. It's a very powerful toolkit, very appropriate for many bio problems with large datasets requiring integration of diverse structured input data types. 1/

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  18. proslijedio/la je Tweet
    16. srp 2018.

    The first full draft of my textbook Advanced Statistical Computing is now available on ! Still need to add some details and more examples, but the bulk of it is there. Feedback welcome!

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  19. proslijedio/la je Tweet
    7. srp 2018.

    As promised: Some words of wisdom from at the BoF on Mentoring. : Make expectations clear. Set short and long term goals. Balance hands on / off involvement. Have regular one on one meetings

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  20. proslijedio/la je Tweet

    Making a heart artery, one cell at a time by How single-cell gene expression teaches us lineage of coronary arteries from vein cells

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