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proud of all papers from my lab - but this one in particular! patch-seq on >1,300 neurons from mouse motor
#cortex yields ephys & anatomy for >70#transcriptomic#neuron types. with@hippopedoid@FedericoScala7@AToliasLab@LHartmanis and many others! https://www.biorxiv.org/content/10.1101/2020.02.03.929158v1 …pic.twitter.com/fwIFWBDno8
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We need better tests that can predict those who are likely to progress from latent to active
#TB disease. Here's is our perspective on the role of#transcriptomic signatures in providing new and improved tests https://journals.plos.org/plosmedicine/article?id=10.1371/journal.pmed.1002814 … -
We want to share our most recent paper on Transcriptomic data analysis in bats!
https://www.nature.com/articles/s41598-019-42560-9 … @artibeusmx#transcriptomic#rnaseq#bats -
A
#genome-wide#transcriptomic analysis of protein-coding genes in human#blood#cells@sciencemagazinehttps://science.sciencemag.org/content/366/6472/eaax9198 … -
Fascinating work from Damas et al. on the
#transcriptomic response to resistance exercise. As expected, untrained (UT) and trained (T) muscle responds differently. Pronounced inflammatory signaling in UT compared to refined muscle remodeling signals in T. https://link.springer.com/article/10.1007/s00421-018-3984-y …Prikaži ovu nit -
Check out our new pub! Variation in
#transcriptomic and#epigenomic response between mouse strains: https://www.toxstrategies.com/2017/11/toxstrategies-scientist-dr-grace-chappell-publishes-variation-transcriptomic-epigenomic-response-mouse-strains/ …pic.twitter.com/4YhAC2LxkX
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'Convergence in form and function overcomes non-parallel evol. histories in Arctic charr' ..where parallelism minimal at nucleotide level, but high at
#transcriptomic and phenotypic levels. Extensive analyses within this#preprint from @arnejacobs90 et al!https://www.biorxiv.org/content/early/2018/02/14/265272 … -
Gene network reconstruction (
#GRN) using#singlecell#transcriptomic data reveals key factors for#embryonic#stemcell#differentiation https://www.biorxiv.org/content/10.1101/2019.12.20.884163v1 …pic.twitter.com/DKJ5lp4Q0d
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Excited to represent
@goldfinchbio team with “comparative#transcriptomic analysis of#podocytes and human kidney#organoids at single cell resolution” @ISNWCN Working hard to cure#KidneyDiseasepic.twitter.com/8nqSAuJVDO
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#Transcriptomic data can be used to create innovative solutions to improve#aquaculture production of the#blacktigerprawn!@Advanced_prawn@CSTFA_JCU@ISGA_2018#ISGA2018#CSTFA_JCUResearch@jcu#genetics#aquaculturegeneticspic.twitter.com/IBSyUJ4Mur
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From
#transcriptomic studies they can be very useful to observe enrichment and detect concerted changes. For example, Viral Process when an activation of antiviral response. I’ve also found them useful to categorize co-expressed clusters into function groups. -
Latest issue
@Cancer_Cell . Boris Bastian and I break down the#Genomic and#Transcriptomic evolution of#Melanoma . https://www.cell.com/cancer-cell/fulltext/S1535-6108(18)30262-9#.W0N5KWrKcXk.twitter … . Rob Judson's laboratory uses#CRISPR to build melanomas from scratch. https://www.cell.com/cancer-cell/fulltext/S1535-6108(18)30228-9#.W0N5xN2b5OI.twitter …@UCSFCancer#dermatologyPrikaži ovu nit -
#PulmonDB, a web-based database and R library that facilitates exploration of#GeneExpression profiles for#COPD &#IPF integrating#transcriptomic data and curated annotation from different sources. Amazing work by@AnaBetty2304 in@biorxiv_bioinfohttps://www.biorxiv.org/content/10.1101/726745v1 … -
SQUID -
#Transcriptomic Structural Variation Detection from#RNAseq - http://bit.ly/2ud3sOO -@CMUCompBio -
Very excited this is out: https://www.embopress.org/doi/10.15252/emmm.201910431 … ... our paper identifies host
#transcriptomic signatures which are#diagnostic for#typhoid infection - made more tricky by infection being human-restricted and there being no#GoldStandard tests 1/ -
Online first:
#Transcriptomic#signatures related to the#obesity paradox in patients with clear cell#renalcellcarcinoma: a cohort studyhttps://www.thelancet.com/journals/lanonc/article/PIIS1470-2045(19)30797-1/fulltext … -
If you are interested in drug targets in
#Schistosoma haematobium, please check out my latest paper describing an online application for the prioritisation of#drugtargets in this species, based on#genomic,#transcriptomic and#smallmolecule data.https://doi.org/10.1186/s13071-018-3197-6 … -
And a last one before I leave! My dear friend and colleague Irina Matetovici from
@ITMantwerp is defending her#phdthesis on the immune response of the#tsetsefly when infected by T. brucei and the reaction of the#parasite#sleepingsickness#Transcriptomic#RNAseq#protozoologypic.twitter.com/Se1itDXTnW
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Global
#transcriptomic analysis of the#arcuate nucleus following chronic#glucocorticoid treatment#hypothalamus#ARC#RNASeq#Dio2#CRISPRCas9 https://tinyurl.com/molmetab-White pic.twitter.com/ziDvLPTzcZ
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New preprint from my lab w/
@yang_i_li,@JackHumphrey_ & G.Wong: prioritizing#Parkinson’s disease genes using population-scale#transcriptomic data. We implicate innate immune & RNA splicing mechanisms in Parkinson’s disease risk. https://twitter.com/biorxiv_genomic/status/939163060505333762 …
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