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OMG so I just be suggested by
@MEnashaat today for the amazing#suite2p package in#python and everything worked just as easy as possible! This is absolutely incredible! Now trying if this can also work for 1P data…if so that would be the best thing happens to my PhD so far!https://twitter.com/marius10p/status/1032804776633880583 …
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I am impressed how straightforward and how accurate suite2p
#suite2p is just after a some minutes of trying it out. Thanks for the great work@marius10p and@computingnature.pic.twitter.com/1jh4zNMIZI
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Thanks to the gods (
@marius10p and col., at@HHMIJanelia) bc now he have#suite2p. Amen
pic.twitter.com/bWZmv9Rs6n
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In research hijinks today, I call this masterpiece of modern art "incorrect
#Suite2p parameters #32" pic.twitter.com/S9w2DHahW5
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Talks and tutorials from workshops now live https://www.janelia.org/lab/pachitariu-lab/talks …
#suite2p#kilosort2@computingnaturepic.twitter.com/QeT5v3WOVW
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Had a fantastic
#suite2p workshop@HHMIJanelia. now back to work. tremendous thanks to the great@marius10p and@computingnature.pic.twitter.com/Q3OqWnFE0U
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Here's the board of issues at the end. Lots of progress during the
#suite2p workshop, a lot of it contributed by the participants! pic.twitter.com/rofS8aoa9I
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Getting ready for the
#suite2p workshop! pic.twitter.com/Z9yJTtErJo
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Science win today, 913 simultaneously recorded neurons from one plane in hippocampal CA1! All thanks to
#suite2p from@computingnature and@marius10p. Downloaded this morning, tweaked a few parameters, and got this beauty in a fraction of the old algorithm's run time
pic.twitter.com/s1e6WyHRLl
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Join one or both back-to-back workshops on analyzing calcium imaging and e-phys data with
#Suite2p and#Kilosort2. We provide meals, housing and compute power - you bring the data! Apply by July 14. http://bit.ly/DAP19@marius10p@computingnature@HHMIJanelia pic.twitter.com/IgFnxtYV0K
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we are really grateful to the experimentalists who give us feedback on github and have made
#suite2p better. If you're using imaging pipelines and have questions or suggestions bother (nicely) the developers :) https://twitter.com/adilgkhan/status/1087018638211715072 …
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#Suite2p at its best! Now can detect z-drift, vasodilation and motion artifacts - the ultimate test for negative GCaMP signals! Heads up to@marius10p and@computingnature for keeping sharing these amazing tools on@github https://github.com/MouseLand/suite2p/wiki/Using-the-GUI#view-registration-metrics …https://twitter.com/marius10p/status/1051494533786193920 …
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#Suite2P updates, and it is really great they share their tools with the community!#opensourcehttps://twitter.com/marius10p/status/1051494533786193920 …
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The making of a whole mouse, y'all! @HHMIJanelia on
. Right after the spines tour de force paper and Voltron and the connectome before that one and #Suite2p before that one, Gasp!@nspruston@computingnature@marius10p@svoboda314@dddavi@MishaAhrens and teams, WELL DONE!https://twitter.com/HHMIJanelia/status/1051137047744925698 …
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Oh, the
#Python version of#Suite2p is so sweet. GUI is running quite smoothly and pipeline runs much faster than CaImAn/CMNF https://twitter.com/marius10p/status/1032804776633880583 …
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It's out! We now have a circuit for the interactions of 4 key cell types in cortex. And it fits the data. Vision and Locomotion Shape the Interactions between Neuron Types in Mouse Visual Cortex http://doi.org/10.1016/j.neuron.2018.03.037 … Thank you
@MarioDipoppa,@marius10p#Suite2p, and team. pic.twitter.com/uHzGjnobyA
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I'm trying to understand how cortex processes information from the external world. Here's a recording of mouse visual cortex while the mouse is viewing natural images. We're able to record over 10,000 neurons simultaneously thanks to new processing methods (
#Suite2P@marius10p)pic.twitter.com/YMlor2R6EbPrikaži ovu nit -
Come learn about
#suite2p at our poster tues AM WW36. Existing users also welcome! :)#SfN17https://twitter.com/marius10p/status/929702053231853568 …
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Anyone using
#suite2p might find this useful to merge ROIs that belong to the same cell.@marius10p http://www.billconnelly.net/?p=471 -
Henry Dalgleish (Hausser lab) demos
@marius10p 's#Suite2p workflow for matching two 2p data sets (e.g., cross-day). https://www.youtube.com/watch?v=AwVYeyh2O6A …
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