Rezultati pretraživanja
  1. prije 21 sat

    We're excited to release a update for the analysis and visualization of data, focussing on Visium and MERFISH, thx . Tutorial at Support for different data types and integration with soon!

  2. 1. velj

    In our & work we use 's databases. Two months ago noticed some inconsistencies between 's cDNA fasta and GTF files and investigated with . Now has written up an in-depth analysis:

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  3. 29. lis 2019.

    Excited to share our scVelo manuscript - led by and , we generalize the beautiful RNA velocity concept from and to transient cell states through dynamical modeling. and

  4. 4. velj

    Single-cell transcriptomic atlas of the human retina identifies cell types associated with age-related macular degeneration Fig. Single-cell transcriptomic analysis reveals human retina diversity | Ref:

    Single-cell transcriptomic analysis reveals human retina diversity. a Study design and sample preparation. Postmortem human retinas were enzymatically dissociated and single-cells were isolated. cDNA single-cell libraries were generated and sequenced. We profiled 20,091 cells across the retinas of three normal individuals using a droplet-based microfluidics scRNA-seq platform. b Sketch of retina cross-section showing
  5. 19. pro 2019.

    Very excited to share our new preprint describing a method for ultra-high throughput single-cell RNA-seq

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  6. 4. velj 2019.

    How to arrange in space? We released the code of novoSpaRc, including scripts reproducing results of our paper

  7. 3. velj

    Researchers from the systematically evaluate the performance of 18 state-of-the-art imputation methods using cell line and tissue data measured across experimental protocols.

  8. 29. sij

    Cell atlas of the human thymus during development | | Tom Taghon, Muzlifah Haniffa & Sarah Teichmann | Preprint

  9. 17. lip 2019.

    Yoooo...MULTI-seq paper is live on !! Our sample multiplexing method uses lipid-modified oligos to append sample barcodes to cells and nuclei regardless of species or surface markers shouts to

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  10. 12. pro 2019.

    Congrats on the official pub Dylan and Lauren () - excellent work! We hope that all you fish folk find some useful transcriptional cell types, genes, and trajectories to keep you busy for a while. Let us know how we can help.

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  11. 3. velj

    I've spent a lot of time the past two weeks writing and editing R and python code for analysis. Python has eclipsed R. Don't @ me.

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  12. ZipSeq: Barcoding for Real-time Mapping of Single Cell Transcriptomes. Using ZipSeq, they mapped gene expression in 3 settings: in-vitro wound healing, live lymph node sections & in a live tumor microenvironment (TME) Ref:

    ZipSeq: Barcoding for Real-time Mapping of Single Cell Transcriptomes.  Using ZipSeq, they mapped gene expression in 3 settings: in-vitro wound healing, live lymph node sections & in a live tumor microenvironment (TME)  Ref: http://bit.ly/37ZNrN4  #singlecell #ZipSeq #scRNAseq
  13. 22. kol 2019.
  14. 12. stu 2019.

    Check out our paper using to interrogate in liver , now out in . Single-Cell Transcriptomics Uncovers Zonation of Function in the Mesenchyme during Liver Fibrosis

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  15. 7. stu 2019.

    Wondered how chromatin is targeted? Our on Dppa2/4 is online! We use , and in to uncover an exciting new mechanism.

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  16. 15. sij

    NIGHTMARE AFTER XMAS! SORRY/HAPPY to present our benchmarking work on sample preservation artifacts. We detected strong systematic biases related to sampling timing! MUST-READ for and of and clinical cohorts.

  17. prije 4 sata

    Great tutorial by Malte Lücken on at the Workshop on Computational Models in Biology and Medicine 2020. Check out the paper: , , .

  18. prije 10 sati
    Odgovor korisnicima

    50mu AFAIK ie ~5cells depending on tissue. So deconvolution using is necessary to get true single cell resolution.

  19. ZipSeq: Barcoding for Real-time Mapping of Single Cell Transcriptomes. ZipSeq uses patterned illumination and photocaged oligonucleotides to serially print barcodes (Zipcodes) onto live cells within intact tissues Ref:

    ZipSeq: Barcoding for Real-time Mapping of Single Cell Transcriptomes.  ZipSeq uses patterned illumination and photocaged oligonucleotides to serially print barcodes (Zipcodes) onto live cells within intact tissues  Ref: http://bit.ly/37ZNrN4  #singlecell #ZipSeq #scRNAseq
    ZipSeq: Barcoding for Real-time Mapping of Single Cell Transcriptomes.  ZipSeq uses patterned illumination and photocaged oligonucleotides to serially print barcodes (Zipcodes) onto live cells within intact tissues  Ref: http://bit.ly/37ZNrN4  #singlecell #ZipSeq #scRNAseq
  20. prije 16 sati

    They are birds... They are planes... They are ! – mjesto: Johns Hopkins School of Medicine

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