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We're excited to release a
#scanpy update for the analysis and visualization of#spatialTranscriptomics data, focussing on@10xGenomics Visium and MERFISH, thx@g_palla1. Tutorial at https://nbviewer.jupyter.org/github/theislab/scanpy-tutorials/blob/master/analysis-visualization-spatial.ipynb … Support for different data types and integration with#scRNAseq soon!pic.twitter.com/SC6sYldpED
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We are excited to announce the acquisition of
@STomics, a pioneer in the emerging field of#spatialtranscriptomics. The new field allows researchers to not only see what is in a cell, but how the cells are organized in relation to one another. https://bit.ly/2C24v7x -
We are hiring a molecular biologist for our team at
@10xGenomics Stockholm. Please share and/or let me know if interested.#spatialtranscriptomics https://www.10xgenomics.com/careers/molecular-biology-scientist-stockholm-sweden/ … -
OMG...
#spatialtranscriptomics is getting cleverer by the minute! ZipSeq : Barcoding for Real-time Mapping of Single Cell Transcriptomes | bioRxiv https://www.biorxiv.org/content/10.1101/2020.02.04.932988v1 … -
An organ-wide gene expression atlas of the developing human heart
#SpatialTranscriptomics#SingleCell#Spatial#RNAseq https://papers.ssrn.com/sol3/papers.cfm?abstract_id=3219263 … -
We would like to welcome
@STomics to the 10x family! We are joining forces to provide researchers with innovative tools to help drive new discoveries within disease areas, such as oncology, neurology and immunology. https://bit.ly/2C24v7x#spatialtranscriptomics pic.twitter.com/axxfhY9NMl
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PremasLifeSc: RT Divyaj007: Interactive discussions gujaratuni on
#singlecellgenomics and its myriad application 10xGenomics PremasLifeSc#genomics#spatialTranscriptomics pic.twitter.com/saRcnsyiWF
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I need to RT this again after skimming through this ms...So impressed and excited about this tech!!!. It’ll pave the way for new type of
#spatialtranscriptomics. So little time since#MultiSeq came out and BOOM, a new crazy adaptation!@Kenneth, dude, you rock! Kudos to the team!https://twitter.com/lgmartelotto/status/1224884141381914625 … -
We are pleased to announce Joakim Lundeberg
@joalunatkthse of the@scilifelab as invited speaker@Microgenomics2. He will speak about Spatial Transcriptomics in the context of tissue morphology in health and disease@scilifelab#spatialtranscriptomics#geneexpression -
@viegasf &@wattenberg mentioned PCA, UMAP and TSNE methods for visualizing high dimensional data at their#rstudioconf keynote We use them also in#genomics like in#scRNAseq#snRNAseq#SpatialTranscriptomics It’s great to see the overlap in methods across fields ^^ pic.twitter.com/rIFvwogjQJ
Prikaži ovu nit -
Check out my latest blog post
#bioinformatics tutorial + tips on#RNAvelocity analysis (in situ) using sample#singlecell data from our latest@PNASNews paper on 10k gene#spatialtranscriptomics by#MERFISH https://jef.works/blog/2020/01/14/rna_velocity_analysis_tutorial_tips/ …#Rstats#rTutorial#DataScience#transcriptomicspic.twitter.com/CCWni1IFyV
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Completed
#Visium@10xGenomics training this week, in partnership with the HDBR,@bioImaging_NCL &@nclbsu - watch this space in 2020!!!#SpatialTranscriptomics @NCLSciFaci@nubiosciences

pic.twitter.com/0FTDCJIQua
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Kicking off the morning with a talk on an exciting & novel
#SpatialTranscriptomics technology (Visium) from@10xGenomics! Science is wild y’all
pic.twitter.com/KtyM2UMra3
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Spatial reconstruction from scRNAseq obtained on dissociated tissues |
#scRNAseq#spatialtranscriptomics#novoSpaRc | Nikolaus Rajewsky & Nir Friedman@N_Rajewsky@nirfriedman@mor_nitzan@nu_karaiskos@BIMSB_MDC@MDC_Berlin@CseHuji | Nature@nature https://rdcu.be/bXeEa pic.twitter.com/s9W8S9tuV2
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Our lab at
@DanaFarber and@harvardmed is recruiting computational biologists to work on#spatialtranscriptomics and cancer#epigenetics projects. Please pass on the info to anyone you know whom might be interested. http://bcb.dfci.harvard.edu/~gcyuan/position.html … -
Our second call for access to free-of-charge cutting-edge sequencing services
@EasiGenomics is OPEN! Have a look at https://bit.ly/2Br0ys1#ancientdna#singlecell#longreadsequencing#spatialtranscriptomics#epigenetics#humandiseases#genomicspic.twitter.com/BmeFXw0tnG
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Tom Weber from the lab, and Casey Anttila from Cytometry and SCORE are brilliant scientists AND great artists it turns out. Congratulations on winning first prize. It's actually a 1st gen
#spatialtranscriptomics optimisation slide that went horribly wrong.@10xGenomicshttps://twitter.com/WEHI_research/status/1172079912032690177 …
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Check out our
@PNASNews paper on 10K gene#spatialtranscriptomics by#MERFISH with ∼80% detection efficiency: https://www.pnas.org/content/early/2019/09/06/1912459116 … We infer#RNAvelocity in situ + pseudotime to reveal genes with#cellcycle dependent expression + more#singlecell#bioinformatics#BigDatapic.twitter.com/3pgKGgcpSc
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