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Osobe Vidi sve
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We've released our first pA-DamID experiments ( 49 sets from
@bvansteensellab ) on the 4DN data portal: https://data.4dnucleome.org/browse/?experimentset_type=replicate&type=ExperimentSetReplicate&public_release.from=2020-02-01&public_release.to=2020-02-03 …#4DNucleome#FAIRdata -
#NewNProt: Efficient detection of high-resolution#HiC contacts with FitHiC2 https://go.nature.com/37y7dz5@kaul4science@SouryaBhattach5@ferhatay#4dnucleome -
HiPiler v1.4 is out
I finally added support for modern Cooler files (>v0.8) thanks to @nv1ctus, custom gene annotations, and updated to@higlass_io v1.7! Also, huge thanks to@liz__is for reporting issues and testing.#4DNucleome#3DGenome#biovishttp://hipiler.higlass.io -
Slides for my
#4DNucleome 2019 Annual Meeting presentation about@higlass_io & related visualization efforts: https://www.slideshare.net/ngehlenborg/higlass-friends … Big shoutout to@pkerpedjiev +@flekschas +@nv1ctus for making it happen & the analysts + developers who are using our tools!
#dataviz#biovis -
Hey
#4DNucleome tweeps, did you know that when you drop a link to a shared@higlass_io view into a tweet you will automagically get a thumbnail preview your view embedded in your tweet? Try it yourself! http://higlass.io/l/?d=Mw-fetUKS_CxlpEKkEHUuQ … H/T@pkerpedjiev@flekschas@nv1ctus#biovis#dataviz -
4D NUCLEOME PHASE 2 Four new 4DN RFAs (Phase 2) have just been published earlier today. The announcement can be seen on the NIH Common Fund Website (https://commonfund.nih.gov/4dnucleome ).
#4DN#4DNucleome#phase2#NIH#NIHCommonFund -
Todo listo para la primera prueba del prototipo de
#Genigma en el#openprbb@the_prbb ¿Vienes a probarlo?#cancerresearch#3Dgenome#4Dnucleome@MarciusLab@mamartirenom@jrotwitguez@elibroglio@jocsalsegon@a_altarribab@CRGenomica@cnag_eu@ORION_openscipic.twitter.com/tN79LMEh9b
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#OpenForReads!@biorxivpreprint ... We show the#4DNucleome during B-cell differentiation and cancer (#lymphoma). Great work of Paula Soler-Vila (@MarciusLab at@cnag_eu), Roser Vilarrasa-Blasi (Martin-Subero Lab at@idibaps) and many more.
https://www.biorxiv.org/content/10.1101/764910v2 … -
Relevant Hi-C datasets publicly available on the 4DN data portal: https://data.4dnucleome.org/search/?type=ExperimentSetReplicate&accession=4DNESFOADERB&accession=4DNESFI64TG3&accession=4DNESU95RUNO&accession=4DNESPOC41XG …
#4DNucleome#FAIRdatahttps://twitter.com/charlesdanko/status/1171577503300952064 … -
Impressive talk by Elisa Oricchio (Lausanne) on 3D chromosomal organization in lymphoma! Read her recent
@NatureGenet paper.#FASEBSRC#FASEBHM2019#4Dnucleome#lymphoma -
#OpenForReads! Our latest preprint was posted yesterday on@biorxivpreprint ... Paula Soler-Vila and Pol Cuscó Pons, with the help of many@Marciuslab members developed TADpol for a robust hierarchical detection of TADs.#3DGenomics#4DNucleome.
https://www.biorxiv.org/content/10.1101/698720v1 … -
#4DNucleome#3DGenomics during spermatogeneisi! So happy to have done this collaboration with@A_RuizHerrera and her team! From us@yasminacuartero and François Le Dily contributed. You can get all the details at the@CellReports journal today!
https://www.cell.com/cell-reports/fulltext/S2211-1247(19)30803-4 … -
Congratulations
@PAskjaer at@CABD_UPO_CSIC@Dmc2Cabd@gusaneros1, member of the@SEBD, for his contribution to new publication on a novel mechanism of#3Dgenome#4Dnucleome organization through sequestration of CBP/p300 by H3K36me3 led by@susan_gasserhttps://twitter.com/PAskjaer/status/1131573501419302912 …
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Proud to have contributed to the discovery of a novel mechanism of
#3Dgenome#4Dnucleome organization through sequestration of CBP/p300 by H3K36me3; led by@susan_gasser http://lnkd.in/emv3RzA pic.twitter.com/FXYm6CLDvK
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Dr. Jennifer Phillips-Cremins (
@CreminsLab) of@Penn is creating research tools as part of our@4DNucleome program. Learn how a passion to help people with#NeurologicalDisorders drives Dr. Phillips-Cremins and her#4DNucleome research!#WomenInScience https://go.usa.gov/xENcu pic.twitter.com/XymE0cQjCr
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Very happy to join
@PLOSCompBiol editorial board as an associate editor. Please send your best computational work in#3dgenome#4dnucleome our way -
The
#4DNucleome portal serves as a great resource for researchers, providing free access to datasets, software, and protocols to advance biomedical research of#NuclearArchitecture!@NIH_CommonFund@4DNucleome https://www.4dnucleome.org/#ThisIsNIH#DataSharingpic.twitter.com/WkbIUCPva8
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Long time in the making. When 1d search for RT cis elements fails but 3d genome comes to the rescue. and crispr of course, a lot of crispr...
#3dgenome#4dn#4dnucleome#erce@simajiao@abhijitchak23@vishnudileep200@Peter_Fraser1@gilbert_labhttps://twitter.com/3D_Genome/status/1078333018480218112 … -
Hey... artists out there (in any discipline of art): We need to artistically convey complex 3D Genomes (a.k.a. help scientists to communicate!)...
Apply now! (deadline in 6 days!)
http://bit.ly/3DResidency
#art#3dgenome#4dnucleome -
Great opportunity to meet again with good friends
, enjoy a beautiful country
and, by the way, learn about #3DGenomics/#4DNucleome great science... hope to be up for the task!
http://meetings.embo.org/event/19-3dgenome …
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