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Prikvačeni tweet
Our paper on Selene is online! Give it a read to learn more about our PyTorch-based library for developing deep learning models of biological sequence data.
https://www.nature.com/articles/s41592-019-0360-8 …Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Evan Cofer proslijedio/la je Tweet
On World Cancer Day I am doing the pretesting for my 4th phase I clinical trial. Medical research has allowed me to live with stage IV lung cancer for FIFTEEN years and counting.
#WorldCancerDay
#lcsmHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Evan Cofer proslijedio/la je Tweet
Mathematics for machine learning, with
@mpd37 and@AnalogAldo , to be published by Cambridge University Press. Final draft submitted. https://mml-book.comHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Evan Cofer proslijedio/la je Tweet
Nobody has more incentive to cure rare diseases than patients and their families - but they often lack the resources and knowledge to make serious impact. Kudos to Tania Simoncelli and CZI for putting serious money into closing this gap.https://www.statnews.com/2020/02/03/chan-zuckerberg-initiative-to-fund-30-patient-groups-aiming-to-build-a-model-for-tackling-rare-diseases/ …
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Evan Cofer proslijedio/la je Tweet
1. Four years ago, when we launched our first bio fund, the idea that software would make an impact in drug discovery sounded like science fiction; the idea it could transform the patient experience in healthcare a fool’s errand.https://a16z.com/2020/02/04/bio-fund-iii-announcement/ …
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Evan Cofer proslijedio/la je Tweet
New paper online in
@naturemethods! An optimized chemical-genetic method for cell-specific metabolic labeling of RNA https://www.nature.com/articles/s41592-019-0726-y … Thank you to reviewers and editorial staff for their very helpful comments and guidance!Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Evan Cofer proslijedio/la je Tweet
Out today in
@naturemethods, our Perspective on SciPy!!! Made fully open access in the spirit of the project and because it's so important for the communityhttps://www.nature.com/articles/s41592-019-0686-2 …Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Evan Cofer proslijedio/la je Tweet
Introducing "Targeted nanopore sequencing by real-time mapping of raw electrical signal with UNCALLED" with
@samkovaka@timp0 et al. Does selective enrichment and depletion of any targeted genomic region purely in software for@nanopore sequencing.https://www.biorxiv.org/content/10.1101/2020.02.03.931923v1 …Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Evan Cofer proslijedio/la je Tweet
Programmers in early population genetics were mostly women, who were not given authorship on the papers. “She and her colleagues found that in the 1970s, women accounted for 59 percent of acknowledged programmers, but just 7 percent of actual authors. “https://www.theatlantic.com/science/archive/2019/02/womens-history-in-science-hidden-footnotes/582472/ …
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Evan Cofer proslijedio/la je Tweet
This is a nice package for making pyplot animations more intuitive: https://github.com/jwkvam/celluloid/ … All you do is call "camera.snap()" every time you re-do the plot.pic.twitter.com/FYwYkU2KSB
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Evan Cofer proslijedio/la je Tweet
PolyGame: An open-source framework for training AI players through self-play. Deals with many games, board size variation, partial observability... Interesting generalization tidbit: It plays Go on 19x19 at very good level after training only on 13x13.https://ai.facebook.com/blog/open-sourcing-polygames-a-new-framework-for-training-ai-bots-through-self-play/ …
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Evan Cofer proslijedio/la je Tweet
VCs: "don't you dare send an NDA before meeting with us or you're a joke. ideas are worthless." Also VCs: "welcome to our office please use this nice iPad to sign a one-way NDA. our ideas are worth everything."pic.twitter.com/U8kxkTNcRM
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Evan Cofer proslijedio/la je Tweet
Big congrats on the launch
@CovariantAI !
It's awesome to see more examples of cutting edge deep learning lifted from proxy tasks in a research lab into real-world applications, where the problems/challenges "backprop" to you from economics. Good luck!https://twitter.com/CovariantAI/status/1222560287124930560 …Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Evan Cofer proslijedio/la je Tweet
I’m an Astros fan. To understand the scope of the Astros cheating & the players involved, I logged every trashcan bang from every Astros 2017 home game w/ video available. Over 8,200 pitches watched and over 1,100 trashcan bangs found. The results are at http://signstealingscandal.com .
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Evan Cofer proslijedio/la je Tweet
Check this out: it's Bowtie2 running in the browser using WebAssembly!

This is still preliminary (I disabled SIMD and threads) but I'd like to figure out how this could be useful as a sandbox on the web; ideas are welcome! #bioinformatics#webassembly cc@BenLangmeadpic.twitter.com/63iR55ikArHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Evan Cofer proslijedio/la je Tweet
Introducing the new Thinc, a refreshing functional take on deep learning!
Static type checking
Mix @PyTorch,@TensorFlow &@ApacheMXNet
Integrated config system
Extensible backends incl. JAX (experimental)
Variable-length sequences & morehttps://thinc.ai Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Evan Cofer proslijedio/la je Tweet
This is a phenomenal review on gene regulation by Molly Gasperini and co-authors. Highly recommend to folks in the biosciences. It's a super fascinating time to watch gene regulation, genetic engineering, and human/population genetics fields coalesce.https://twitter.com/MollyGasp/status/1222178847983980546 …
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Evan Cofer proslijedio/la je Tweet
Out today - Deep learning models predict regulatory variants in pancreatic islets and refine type 2 diabetes association signals https://doi.org/10.7554/eLife.51503 …pic.twitter.com/ksw8an45pV
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Evan Cofer proslijedio/la je Tweet
Even though there may be a million+ enhancers in the human genome, understanding their role is formidable. And so is this review, by
@MollyGasp Jacob Tome and@JShendure@NatureRevGenet https://www.nature.com/articles/s41576-019-0209-0 … A great summary figurepic.twitter.com/nubQD7GPww
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Evan Cofer proslijedio/la je Tweet
Don't assume good health is forever. Don't assume a sharp mind is forever. Don't assume your loved ones are forever. Don't assume you have unlimited time. Do the things you want to do while you have the opportunity, and hug your loved ones close.
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Evan Cofer proslijedio/la je Tweet
Putting myself out there to volunteer for invited talks next year in institutes and conferences in
#Europe,#americas,#asia,#australia,#africa, on translational#bioinformatics. Call, email, or DM me, if you need an energetic, dynamic, solid#female#bioinformatician. Thanks!https://twitter.com/GarmireGroup/status/1205196979791441920 …Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi
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