Elisabetta Mereu

@elisabetta1412

Mathematician and Computational biologist @ Single Cell Genomics Team (CNAG-CRG)

Barcelona, Spain
elisabettamereu.netlify.com
Vrijeme pridruživanja: listopad 2012.
43 fotografije ili videozapisa Fotografije i videozapisi

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  1. Prikvačeni tweet
    14. svi 2019.

    I’m excited to share our benchmarking of scRNA-seq protocols.Methods were compared in their ability to recapitulate the original structure of complex tissues. MatchSCore2 () was used to annotate all datasets by a log regression model!

    1 reply 56 proslijeđenih tweetova 153 korisnika označavaju da im se sviđa
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  2. proslijedio/la je Tweet
    prije 17 sati

    Human Technopole in Milan, is looking for the Head of Research Centre for Computational Biology. We are working to construct a very exciting, international, interactive research organization and looking for an outstanding director for this centre.

    18 proslijeđenih tweetova 14 korisnika označava da im se sviđa
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  3. 2. velj

    Joining forces for our common ESPACE project with and in wonderful Berlin

    1 proslijeđeni tweet 11 korisnika označava da im se sviđa
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  4. proslijedio/la je Tweet
    31. sij

    Integrated single cell analysis of blood and cerebrospinal fluid leukocytes in multiple sclerosis | ⁦⁩ #RNAseq#MultipleSclerosis -

    7 proslijeđenih tweetova 33 korisnika označavaju da im se sviđa
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  5. proslijedio/la je Tweet
    30. sij

    Thanks to everyone who tuned in for ! Selected slides, video, and resources are now available at For those in a different time zone, we will rebroadcast the entire livestream next Thursday (2/6) at 9:30PM EST.

    7 replies 77 proslijeđenih tweetova 278 korisnika označava da im se sviđa
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  6. proslijedio/la je Tweet
    24. sij

    tSNE & Perplexity: In general larger perplexity helps tSNE to recovery more large structural information. Here is nice example for this behavior: mapping 500K points from 3D space to 2D plane .

    Korisnici , i
    12 proslijeđenih tweetova 37 korisnika označava da im se sviđa
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  7. proslijedio/la je Tweet
    23. sij

    Livestream for our free single cell workshop starts tomorrow at 9:30AM EST. If you're watching online, you can tweet questions using , and we'll relay to presenters in the room. See you tomorrow!

    8 replies 106 proslijeđenih tweetova 228 korisnika označava da im se sviđa
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  8. proslijedio/la je Tweet
    21. sij

    Our lab is growing! Interested in multi-modal/spatial single-cell analysis? We are seeking applications for experimental and computational staff scientists until 2/15, and are always recruiting postdocs. More info at . Just DM me a CV to apply, please RT!

    111 proslijeđenih tweetova 163 korisnika označavaju da im se sviđa
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  9. proslijedio/la je Tweet
    19. sij

    PhD student Archit Verma & I posted a semi-supervised method for manifold alignment. E.g., given disassociated cells with scRNA-seq & unpaired spatial transcriptomics mapped in a coordinate framework, we localize disassociated cells in the space. & confounder correction.

    36 proslijeđenih tweetova 117 korisnika označava da im se sviđa
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  10. proslijedio/la je Tweet
    17. sij

    🚨New + jobs 🚨 w/ me in Bioinformatics & Cellular Genomics group , ! Apply if you like all things , ( ) and join our friendly team! Plz RT

    78 proslijeđenih tweetova 61 korisnik označava da mu se sviđa
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  11. proslijedio/la je Tweet
    17. sij

    Signac v0.2.0 is now available. This release removes several dependencies to make installation easier

    8 proslijeđenih tweetova 30 korisnika označava da im se sviđa
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  12. proslijedio/la je Tweet
    15. sij

    They say “it’s all about timing”, and apparently they were right. New preprint assessing impact of processing timing on single-cell data. Congrats et al!

    NIGHTMARE AFTER XMAS! SORRY/HAPPY to present our benchmarking work on sample preservation artifacts. We detected strong systematic biases related to sampling timing! MUST-READ for and of and clinical cohorts.
    1 proslijeđeni tweet 5 korisnika označava da im se sviđa
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  13. proslijedio/la je Tweet
    15. sij

    NIGHTMARE AFTER XMAS! SORRY/HAPPY to present our benchmarking work on sample preservation artifacts. We detected strong systematic biases related to sampling timing! MUST-READ for and of and clinical cohorts.

    6 replies 111 proslijeđenih tweetova 264 korisnika označavaju da im se sviđa
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  14. proslijedio/la je Tweet
    14. sij

    Interested in single cell genomics but need help getting started? Check out the agenda for my lab's free workshop next Friday. Very excited that we will be livestreaming all talks with the support of ! Please RT and spread the word!

    8 replies 316 proslijeđenih tweetova 505 korisnika označava da im se sviđa
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  15. proslijedio/la je Tweet
    14. sij

    Our paper, in collaboration with , on using CNNs for understanding (i.e, "interpreting") regulatory sequences across the immune system is up. Was truly a joint computational + biological effort to both model and gain bio insights 1/

    1 reply 28 proslijeđenih tweetova 106 korisnika označava da im se sviđa
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  16. proslijedio/la je Tweet
    12. sij

    What makes a good lab? Are group meetings really the best way? In the we recently reexamined how we organize our weeks, and then redesigned everything in a systematic way (100% democratically!). I blogged about our design process and takeaways:

    19 replies 158 proslijeđenih tweetova 554 korisnika označavaju da im se sviđa
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  17. proslijedio/la je Tweet
    8. sij

    If you can, please donate to Wildlife Emergency Fund. Even $1 would be helpful. More than a billion animals have died during these catastrophic , numbers will be more devastating in the next few months due to the lack of refuge, food and water.

    7 proslijeđenih tweetova 16 korisnika označava da im se sviđa
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  18. proslijedio/la je Tweet
    7. sij

    *upgrades immediately*

    Scanpy 1.4.5 is out with an overhauled website and a long-overdue first tutorial on dataset integration. Most contributions from Scanpy core (, , , ) with the "ingest" tool due to .
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    1 reply 5 proslijeđenih tweetova 22 korisnika označavaju da im se sviđa
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  19. proslijedio/la je Tweet
    6. sij

    Very happy to present our Comment for Method of the Year 2019: single-cell multimodal analysis

    Our Method of the Year 2019 feature on single-cell multimodal analysis includes Comments from Bing Ren, Sarah Teichmann and Alex Schier . Full text links here: , , .
    23 proslijeđena tweeta 66 korisnika označava da im se sviđa
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  20. proslijedio/la je Tweet
    4. sij

    Identifying gene expression programs of cell-type identity and cellular activity with single-cell RNA-Seq

    13 proslijeđenih tweetova 40 korisnika označava da im se sviđa
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  21. proslijedio/la je Tweet
    2. sij

    Please RT: Two postdoc positions available in my lab: funded experimental position - establishing a spatial single-cell resolution atlas of the human liver.

    1 reply 97 proslijeđenih tweetova 94 korisnika označavaju da im se sviđa
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