daniel falush

@DanielFalush

Statistical genetics of bacteria, humans etc.

Joined September 2014
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  1. Pinned Tweet
    Aug 7

    The Vibrio parahaemolyticus trilogy is now up on archive: Looking for readers (and a very special journal) intrepid enough to venture through and find all the gold.

    2 replies 8 retweets 20 likes
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  2. Retweeted
    Oct 11

    UK Biobank genetics opens the door to a new era of health research -

    7 retweets 8 likes
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  3. Oct 11

    really enjoyed the talk about this at SMBE...

    In this paper we identify the key parameters that govern translation efficiency, and formulate four design principles to optimize it in terms of protein production rate and resource usage.
    1 reply 8 likes
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  4. Oct 9

    little blogpost about Nobel Prize winner Donna Strickland

    1 like
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  5. Retweeted
    Oct 9

    Check out this super cool Cataglyphis ! It's left side is a queen and the right side a male. And no, I don't think it could mate with itself😜

    20 replies 426 retweets 1,183 likes
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  6. Retweeted
    Oct 7

    Good news: found the Frosties gene Bad news: it's HLA

    Cereal type: Other (e.g. Cornflakes, Frosties) Description: Download:
    4 replies 41 retweets 141 likes
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  7. Retweeted
    Oct 2

    Important paper by lab showing utility of experimental evolution to understand in vivo selection in chronic infection experiments like this are vital complement to genomics to reveal selective forces. Shame it’s so hard to get funding for it!

    22 retweets 47 likes
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  8. Retweeted
    Oct 1

    After 6.5 great years at Imperial College, today is my first day at ! It's good to be back after almost 10 years... I'm now a member of and . So many great new colleagues to work with, I can't wait!

    15 replies 5 retweets 121 likes
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  9. Retweeted
    Oct 1

    Our new paper "Panton-Valentine leukocidin is the key determinant of Staphylococcus aureus pyomyositis in a bacterial genome-wide association study" with

    2 replies 15 retweets 25 likes
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  10. Sep 30

    Welcome to twitter

    A high-resolution map of non-crossover events in mice reveals impacts of genetic diversity on meiotic recombination
    1 reply 10 likes
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  11. Retweeted
    Sep 28

    Fascinating new study of the evolution of pathway remodeling by kinase specificity by ⁦⁩ friends ⁦⁩ and Dannie Durand

    5 retweets 5 likes
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  12. Retweeted
    Sep 26

    Teaching undergrad population & quantitative genetics this quarter, will be updating notes over the next ten weeks. First up HWE, relatives, and inbreeding. Draft relatively complete up to ~pg 26

    3 replies 46 retweets 176 likes
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  13. Retweeted
    Sep 27

    "The key distinction between biological and nonbiological systems seems to be the existence of long-term digital memory and phenotype-to-genotype feedback in living matter."

    5 retweets 4 likes
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  14. Retweeted
    Sep 26

    If you're interested in microbial genomics and not reading 's blog, you should. It's a ton of work to write informative, thoughtful blog posts, and these are excellent.

    14 retweets 33 likes
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  15. Retweeted
    Sep 24

    I am super thrilled to share new work on the Omnigenic model with and ! We've been working on this for a while and we hope that you'll find it interesting!

    4 replies 111 retweets 160 likes
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  16. Retweeted
    Sep 24

    Revealing multi-scale population structure in large cohorts If your data has > 3 significant PCs, and > 100 samples, check out UMAP! Below is a visualization of genetic diversity in UK biobank. Details in preprint by outstanding student .

    9 replies 134 retweets 295 likes
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  17. Retweeted
    Sep 17

    After much efforts from many individuals (friends, colleagues, authors, reviewers), our survey of the Sardinia demographic history utilizing whole genome sequences are finally online in Nature genetics today! Readable link here:

    6 replies 66 retweets 143 likes
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  18. Sep 18

    I wrote an update to my '5rhythms manifesto' from 5 years ago, which achieves a pleasing degree of matter of factness, given the subject matter. Comments very welcome. Now back to science.

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  19. Retweeted
    Sep 14

    Interesting work from Patrick and Gil on dating the ages of alleles and shared ancestry:

    7 retweets 2 likes
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  20. Retweeted
    Sep 10

    BactDating is a fast Bayesian method for building bacterial dated trees and the paper is now published by , see . Thanks to co-authors NickCroucher

    Dating of PMEN1, before and after accounting for recombination
    73 retweets 95 likes
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  21. Retweeted
    Sep 5

    A pop gen study with low-pass WGS of >10k Han Chinese individuals was published: Allele frequencies are up on the GGV browser (dataset = CONVERGE with login: )

    24 retweets 52 likes
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