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Prikvačeni tweet
Our benchmarking study of methods to automatically identify cell populations in single-cell RNA sequencing data is now published
@GenomeBiology . Very proud of all the work done by Tamim and Lieke! https://rdcu.be/bRiLK pic.twitter.com/g9mZmoKzQN
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Ahmed Mahfouz proslijedio/la je Tweet
Our huge Patch-seq effort is out on bioRxiv: https://www.biorxiv.org/content/10.1101/2020.02.03.929158v1 …. 1320 neurons in mouse motor cortex patched, sequenced, and mapped to a scRNA-seq atlas. 642 reconstructed morphologies! Our running joke was that it was a bit like catching Pokemons. (1/n)pic.twitter.com/22vAQLyfKT
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Ahmed Mahfouz proslijedio/la je Tweet
Reminder: don’t forget to submit an abstract for the BioSB 2020 conference in April! Final submission deadline is 15 February 2020. http://bit.ly/2sHUOJF
#BioSB20#bioinformatics#systemsbiology@RSGNetherlandspic.twitter.com/J7oWkwI2Sm
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Ahmed Mahfouz proslijedio/la je Tweet
Our educational guide for nanopore sequencing in the classroom is out in
@PLOSCompBiol. Introducing bioinformatics students to the realities of data acquisition, an educational collaboration of@StanBrouns at@TNWTUDelft and myself at@EEMCS_TUD.https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1007314 …Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Come and join us at
#SMRTLeiden, April 28-30@LUMC_Leiden for an exciting meeting. Preview our confirmed speakers & register: https://www.lgtc.nl/SMRTLeiden/ And stay tuned for more updates!@PacBiohttps://twitter.com/PacBio/status/1223525156695482368 …
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Ahmed Mahfouz proslijedio/la je Tweet
We now have a web page for the
#LRUA20 meeting! Registration will open in late February, and more info to come soon... https://www.lrua2020.se@OlgaVPettersson@scilifelab@ngisweden@PacBio@nanoporeHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Ahmed Mahfouz proslijedio/la je Tweet
Thrilled to be part of
#hitseq2020 with this lineup!!!@khmiga@mike_schatz . Thank you@anaconesa and colleagues!https://twitter.com/HiTSeq/status/1214555142734827520 …
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Ahmed Mahfouz proslijedio/la je Tweet
All fresh & energetic after the Xmas break and looking for a new adventure? We have several open positions in Amsterdam for postdocs in bioinformatics or statistical genetics with an interest in optimizing interpretation of GWAS results for brain-related traits. Retweet is
https://twitter.com/DPosthu/status/1186645161272643586 …Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Ahmed Mahfouz proslijedio/la je Tweet
We now have 2 PostDoc positions open with very exciting opportunities to contribute to the Lung Cell Atlas (
@humancellatlas) in health & disease: scRNA/ATAC-Seq, multiplexed FISH, 3D organoids, international consortia, great team! Please RT@ATS_GG@GriacG@3Assembly@cziscienceHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Ahmed Mahfouz proslijedio/la je Tweet
Identification of genomic enhancers through spatial integration of single-cell transcriptomics and epigenomics https://biorxiv.org/cgi/content/short/2019.12.19.882381v1 …
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Ahmed Mahfouz proslijedio/la je Tweet
UMAP is often said to be superior to t-SNE because it is better at preserving global distances. Dmitry and I showed that this is because by default, t-SNE initializes randomly whereas UMAP initializes with Laplacian eigenmaps.https://twitter.com/hippopedoid/status/1207999178015727616 …
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Ahmed Mahfouz proslijedio/la je Tweet
Don’t forget to submit your ideas for a breakout session at the
#BioSB20. Deadline: 15 January 2020#Bioinformatics#systemsbiologyhttps://twitter.com/BioSB_nl/status/1199311405704523776 …
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Ahmed Mahfouz proslijedio/la je Tweet
Today's
#SingleCell reading list in cell-type annotation & labeling scope (in order of publication date): 1.https://f1000research.com/articles/8-296 2.https://genomebiology.biomedcentral.com/articles/10.1186/s13059-019-1795-z … 3.scMatch:https://academic.oup.com/bioinformatics/article/35/22/4688/5480299 … Notes in progress! Interesting strategies employed. Thanks for the work & datasets
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Ahmed Mahfouz proslijedio/la je Tweet
Are you a computational biologist with a fascination for cellular regulation? Make sure to check out this
#postdoc postion in the labs of Thijn Brummelkamp and Lodewyk Wessels@NKI_nl: Mapping cellular regulation from 130 genome-wide phenotype screenshttps://www.oncode.nl/news/new-vacancies-at-oncode-partner-institutes …Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Ahmed Mahfouz proslijedio/la je Tweet
For our English speaking followers: The Philips & LUMC team developed an algorithm with which it is possible to use eight times less data than normal and still reconstruct an MRI image of a knee that is almost as good as one using the usual amount of data: https://bit.ly/2OOXxZQ
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Ahmed Mahfouz proslijedio/la je Tweet
Incredibly proud of our "
#Philips &#LUMC" team, selecetd as strongest performer in the#FastMRI challenge multi-coil 8x. Learn more at@NeurIPSConf. Thanks to the organizers@nyuschoolofmed,@facebookai! Great collaboration between@PhilipsResearch@PhilipsHealth and#LUMC!https://twitter.com/facebookai/status/1201161467145465858 …
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Ahmed Mahfouz proslijedio/la je Tweet
Congratulations, Sahar! And an example of a great collaboration between Philips, LKEB and Gorter!!https://twitter.com/sahar_syousefi/status/1201204053038030849 …
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Ahmed Mahfouz proslijedio/la je Tweet
We kicked-off! Lots of exciting discussions on how we plan to take genetic findings for brain disorders to the next level
#brainscapespic.twitter.com/KyxzGVpeh1
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Ahmed Mahfouz proslijedio/la je Tweet
Genetic mapping and evolutionary analysis of human-expanded cognitive networks. Fantastic work!https://www.nature.com/articles/s41467-019-12764-8 …
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Ahmed Mahfouz proslijedio/la je Tweet
Eye opening article on Elsevier. "Every time we pay a $3000 article processing charge, only $1800 supports the publishing process, while the remaining $1200 goes directly to Elsevier shareholders." They suggest you ask for $400/hr when Elsevier requests that you review a paper.https://twitter.com/SamYoungLab/status/1191708234190663680 …
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Ahmed Mahfouz proslijedio/la je Tweet
I want to give a little more background and detail on some of the new things we're doing at
@eLife https://elifesciences.org/inside-elife/e9091cea/peer-review-new-initiatives-to-enhance-the-value-of-elife-s-process … If you read this and have questions or concerns, I'd love to answer them.Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi
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