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_rdgao's profile
Richard Gao
Richard Gao
Richard Gao
@_rdgao

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Richard Gao

@_rdgao

PhD Student in Computational & Cognitive Neuroscience @ UC San Diego. Iron Ring 1T3

San Diego, CA
rdgao.com
Joined June 2014

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    Richard Gao‏ @_rdgao Jan 8

    Are oscillations and LFPs epiphenomenal? Are spikes epiphenomenal? Am I epiphenomenal? Consolidating a continued debate.http://www.rdgao.com/epiphenomenal-oscillations/ …

    5:48 PM - 8 Jan 2019
    • 57 Retweets
    • 178 Likes
    • Saurabh Ranjan Andreas Brandmaier Jan Kamiński Tara Marina Ortiz-Ithier Robin Gutzen Marta Slashcheva Yu 'Susie' Feng Reto Huber Anirudh Wodeyar
    14 replies 57 retweets 178 likes
      1. Richard Gao‏ @_rdgao Jan 8

        Richard Gao Retweeted Richard Gao

        threading from https://twitter.com/_rdgao/status/1068214736045522945 … (@NeuroBill @MillerLabMIT @scottrcole @neurograce)

        Richard Gao added,

        Richard Gao @_rdgao
        "To dismiss observable signals as an epiphenomenon assumes a level of knowledge that no one has ... The attitude boils down to “they don’t play a role because we kind of already know how the brain works”. No, you don’t. No one does." http://ekmillerlab.mit.edu/2018/11/29/a-controversy-about-whether-brain-waves-play-a-functional-role/ … from @MillerLabMIT
        1 reply 0 retweets 8 likes
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      1. Richard Gao‏ @_rdgao Jan 10

        all the tweet responses are continuously collated/updated here: https://github.com/rdgao/rdgao.github.io/issues/4 … feel free to add issues directly. Will at some point be consolidated and added to the blog post as an addendum.

        0 replies 0 retweets 0 likes
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      1. New conversation
      2. Anne Urai‏ @AnneEUrai Jan 8
        Replying to @_rdgao

        whoa, scientific debate using github issues? this is next-level stuff

        1 reply 0 retweets 9 likes
      3. Dan Lurie  🌹 ✊🏼‏ @danjlurie Jan 8
        Replying to @AnneEUrai @_rdgao

        F-ing brilliant. We tossed around the idea of doing this for our TVC paper, really cool to see it implemented.

        1 reply 0 retweets 3 likes
      4. Richard Gao‏ @_rdgao Jan 8
        Replying to @danjlurie @AnneEUrai

        laziness is the mother of all inventions?

        1 reply 0 retweets 1 like
      5. Richard Gao‏ @_rdgao Jan 8
        Replying to @_rdgao @danjlurie @AnneEUrai

        (refering to my lack of actual commenting system on the blog haha)

        0 replies 0 retweets 1 like
      6. End of conversation
      1. New conversation
      2. Tjeerd Boonstra‏ @TjeerdWBoonstra Jan 9
        Replying to @_rdgao

        Nice blog post. Discussion on circular causality in Synergetics (Haken) and Kuramoto model may also be relevant

        1 reply 0 retweets 5 likes
      3. Richard Gao‏ @_rdgao Jan 9
        Replying to @TjeerdWBoonstra

        thanks! Did you have any specific thoughts in mind regarding synergetics? (I'm not well-versed in that) Would be great to add as an addendum.

        1 reply 0 retweets 0 likes
      4. Tjeerd Boonstra‏ @TjeerdWBoonstra Jan 10
        Replying to @_rdgao

        You describe that spikes and oscillations are both a cause and an effect: spikes likely contribute to oscillations in LFP and spike times are likely influenced by ILP oscillations, e.g. through ephaptic coupling.

        1 reply 0 retweets 2 likes
      5. Tjeerd Boonstra‏ @TjeerdWBoonstra Jan 10
        Replying to @TjeerdWBoonstra @_rdgao

        Haken describes how high-dimensional systems (like spiking neuron populations) can become enslaved (see slaving principle) by order parameters and show low-dimensional dynamics (like oscillations).

        1 reply 0 retweets 1 like
      6. Tjeerd Boonstra‏ @TjeerdWBoonstra Jan 10
        Replying to @TjeerdWBoonstra @_rdgao

        Because the interaction between individual parts enables the existence of order parameters that in turn determine the behavior of the individual parts, one speaks of circular causality: http://www.scholarpedia.org/article/Synergetics …

        1 reply 0 retweets 1 like
      7. Tjeerd Boonstra‏ @TjeerdWBoonstra Jan 10
        Replying to @TjeerdWBoonstra @_rdgao

        This principle lies at the heart of the Kuramoto model, which can be used to model cortical oscillations, see e.g.https://www.frontiersin.org/articles/10.3389/fnhum.2010.00190/full …

        1 reply 0 retweets 1 like
      8. Richard Gao‏ @_rdgao Jan 10
        Replying to @TjeerdWBoonstra

        ahh I see. Yeah I'm familiar with this idea, esp in the context of the circular interaction between spikes and aggregate field, but I didn't know that's what synergetics meant. Thanks for the primer & refs, I'll add to the blog post!

        1 reply 0 retweets 0 likes
      9. Maciej Rudziński‏ @rudzinskimaciej Jan 10
        Replying to @_rdgao @TjeerdWBoonstra

        I'm sure that will help ( ;) ): in haos theory, dynamical systems and network analysis it's an emergent efect of different scales

        1 reply 0 retweets 1 like
      10. 2 more replies
      1. New conversation
      2. Andrew Watrous‏ @AndrewJWatrous Jan 9
        Replying to @_rdgao

        Really nice @rdgao! Our opinion/review is that the issue of oscillations in neural coding can be understood in both a "strong" (i.e. the code) or "weak" (i.e. readout of brain state) sense, either of which is informative for understanding perception/memoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4329113/ …

        1 reply 2 retweets 5 likes
      3. Richard Gao‏ @_rdgao Jan 9
        Replying to @AndrewJWatrous

        whoa not sure how I missed this. thanks for the ref! and exactly, either way, it's worth looking at.

        0 replies 0 retweets 1 like
      4. End of conversation
      1. New conversation
      2. Lydia Maniatis‏ @LydiaManiatis Jan 9
        Replying to @_rdgao

        Oscillations and spike-as-signal concept are, indeed, at odds. But you're wrong that "spikes have been good to us in the last 100 years;" the concept's just resulted in irreproducibility.https://mythsofvisionscience.wordpress.com/2018/05/17/signal-detection-pseudoscience-in-neuroscience-bondy-haefner-and-cumming-2018-point-1a-orientation-tuning/ …

        1 reply 0 retweets 3 likes
      3. Richard Gao‏ @_rdgao Jan 9
        Replying to @LydiaManiatis

        huh. I was just repeating the party line but this is some shit. Thanks for the share, gonna add it to the blog post.

        1 reply 0 retweets 0 likes
      4. Lydia Maniatis‏ @LydiaManiatis Jan 9
        Replying to @_rdgao

        Thanx 4 being interested. Detector notion is kept alive through p-hacking https://mythsofvisionscience.wordpress.com/2018/10/19/contemporary-neuroscience-depends-on-outright-p-hacking-dipoppa-ranson-krumin-pachitariu-carandini-harris-2018/ … and irreproducible resultshttps://mythsofvisionscience.wordpress.com/2018/12/02/it-is-bullshit-none-of-it-replicates/ …

        1 reply 0 retweets 0 likes
      5. Richard Gao‏ @_rdgao Jan 9
        Replying to @LydiaManiatis

        while a little pessimistic even for my taste, these are all existential thoughts I've struggled with myself, and doing better/making improvements is the hard part...thanks again! this is your blog?

        1 reply 0 retweets 0 likes
      6. Lydia Maniatis‏ @LydiaManiatis Jan 10
        Replying to @_rdgao

        Post-reply, I was afraid that might be the case. But the issues aren't that existential, because we can actually look at what has worked in the past, and what is or isn't expected to work in principle. Yes, it's my blog.

        1 reply 0 retweets 2 likes
      7. Lydia Maniatis‏ @LydiaManiatis Jan 10
        Replying to @LydiaManiatis @_rdgao

        You should read Juarrero's "Dynamics in Action" or Deacon's "Incomplete Nature" (which reiterated Juarrero's original ideas) to see why machine metaphors (including computational logic) can't work for complex dynamic self-organizing systems.

        1 reply 1 retweet 3 likes
      8. Anirudh Wodeyar‏ @A_Wodeyar Jan 11
        Replying to @LydiaManiatis @_rdgao

        Currently reading Deacon. I didn't know about the other book, thanks for mentioning this. I need to find that :)

        1 reply 0 retweets 2 likes
      9. Lydia Maniatis‏ @LydiaManiatis Jan 11
        Replying to @A_Wodeyar @_rdgao

        I read Deacon first too; he evidently knew about her work and borrowed heavily, but didn't cite. She complained to Berkeley but was never really vindicated. http://theterrydeaconaffair.com/ 

        0 replies 0 retweets 1 like
      10. End of conversation

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