@WebStormIDE is it possible to support interactive CLIs in the „run“ terminal? That would be awesome 

That depends on the type of configuration you run. Is it an npm script and npm run configuration? Or it is an external tool?
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it is a CLI tool I built but it is referenced in an npm script. if I run it in the terminal I can interact with the npm script but not in the run-terminal.
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You can enable interactive console for npm configurations with the registry key nodejs.console.use.terminal (Find Action - Registry...). And here's an issue about enabling it by default: https://youtrack.jetbrains.com/issue/WEB-36867
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