Every day we are bitten by the fact that because it makes sense for performance reasons for the Intel compilers to be the default, they are the default on our clusters. The number of packages that are written not in C, C++ or Fortran but gcc, g++, gfortran is astounding.
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There are lots of weird cases in scientific software and at least part of it is that historically fortran support in GCC was very bad (no longer the case, it's arguably better than Intel) so a lot of it is "we've always done with ifort and we don't really trust anything else".
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I can't really argue against going with what one is used to. There's a reason why I use TextPad instead of more modern editors, mIRC instead of more modern IRC clients, and GoldWave instead of more modern audio editors.
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