Stephen Rudd

@SAGRudd

Genomics and bioinformatics. Impatiently looking for nirvana but discovering the world. Bioinformatics product management ; opinions & views my own

Harz, Sachsen-Anhalt
Vrijeme pridruživanja: srpanj 2010.

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  1. proslijedio/la je Tweet
    3. velj

    Read Until to enrich >700 genes to mean 30x coverage on single flowcell. Custom panels (up to 25,600 targets so far) as easy as providing a coordinate file. Read more at - thanks to , and team.

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  2. proslijedio/la je Tweet
    31. sij

    When you're an inflight safety pamphlet designer who definitely knows what babies look like

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  3. 1. velj
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  4. proslijedio/la je Tweet
    28. sij
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  5. proslijedio/la je Tweet
    28. sij

    First release of pycoMeth for genome-wide differential DNA methylation analysis from Nanopolish call-methylation. Generates summary for CpG dinucleotides and CpG islands. Basic visualisation with genome Brower, ie .

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  6. proslijedio/la je Tweet
    24. sij

    ARTIC have developed a set of lab and bioinformatics protocols for the nCoV-2019 virus using a targeted multiplex primer scheme. This package enables direct sequencing and real-time analysis with RAMPART of the coronavirus on nanopore sequencers:

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  7. proslijedio/la je Tweet
    15. sij

    Python pandas 1.0 added a to_markdown() function to create a markdown table from a dataframe!

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  8. proslijedio/la je Tweet
    16. sij

    Our lab published a review. I hope you like it, and it was fun to write. I look forward to much writing time this year... =)

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  9. 18. pro 2019.
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  10. proslijedio/la je Tweet
    14. pro 2019.

    The new has a new "coverage" subcommand. Perfect for genome binning! Update now!

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  11. proslijedio/la je Tweet
    13. pro 2019.

    needed an excuse to draw a snake screaming in a camel's face so

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  12. 14. pro 2019.

    WTFuck! Back in Germany and my car’s steering wheel has been stolen! Enough already!

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  13. proslijedio/la je Tweet
    13. pro 2019.
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  14. proslijedio/la je Tweet
    15. stu 2019.

    5.8.1 is released. Big news: it now supports caching intermediate results between workflows, based on a blockchain approach (in collaboration with ):

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  15. proslijedio/la je Tweet
    14. stu 2019.
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  16. proslijedio/la je Tweet
    7. stu 2019.

    Our new preprint on methplotlib, visualization and analysis of nucleotide modifications (for now mainly methylation). With . (Thread)

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    We recently shared our new SV bioinformatics tutorial: . On 14th October, — the man behind the tutorial — will be covering in depth, during a Knowledge Exchange in the community: *login required

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  18. proslijedio/la je Tweet
    17. ruj 2019.

    Amazing...Drone footage of a school of stingrays swimming off the coast of Australia

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  19. proslijedio/la je Tweet
    12. ruj 2019.

    Raven - long read de novo assembler. - with . Raven is an upgraded version of Ra which is now one binary without any intermediate files plus some additional improvements. Any feedback is more than welcome!

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  20. proslijedio/la je Tweet

    New bioinformatics tutorial! This one focuses on structural variation analysis — check it out: *if you don't have a Community login, you can register as a guest to access this, and other bioinformatics resources

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