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Franklin Nobrega proslijedio/la je Tweet
Spatial metabolomics of in situ host–microbe interactions at the micrometre scale | Nature Microbiologyhttps://www.nature.com/articles/s41564-019-0664-6 …
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Franklin Nobrega proslijedio/la je Tweet
Check out our new
@biorxivpreprint with Daniel Phillips,@BioPhysicalMoh and@SGlaven groups about a prokaryotic BAR domain protein involved in making bacterial outer membrane extensions for extracellular electron transfer: https://www.biorxiv.org/content/10.1101/2020.01.30.926147v1 …pic.twitter.com/zkbRv6LF1X
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Franklin Nobrega proslijedio/la je Tweet
Discovery of several thousand highly diverse circular DNA viruses https://doi.org/10.7554/eLife.51971 … well done Michael J Tisza and
@ChrisB_Buck and their crew at NIH, a team effort including@Lab_Sullivan@Varsani_lab,@AncaGeneHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Franklin Nobrega proslijedio/la je Tweet
Excited to share my first first-author
@NatureComms publication as part of my PhD project@LabMoyes &@LIDo_DTP working on antimicrobial resistance#AMR We compare resistomes between the human mouth and the gut https://www.nature.com/articles/s41467-020-14422-w … (1/n)Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Franklin Nobrega proslijedio/la je Tweet
ever wondered why it's not actually bad for flagellated bacteria to have curved cell shapes for active movement? here you are...https://twitter.com/DavidECastroG/status/1157290221521842178 …
0:21Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Franklin Nobrega proslijedio/la je Tweet
Join us and work on plant-microbe interactions by analysing rhizosphere metagenomes: https://www.uu.nl/organisatie/werken-bij-de-universiteit-utrecht/vacatures/postdoctoral-fellow-computational-rhizobiome-analysis-utrecht-university-08-10-fte … please RT - we're accepting postdoc applications until March 1st
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Franklin Nobrega proslijedio/la je Tweet
A nice paper on the identification of the major siderophore in Pseudomonas PvdS as a regulator of Type I-F
#CRISPR acquisition system, CRISPR interference and HGT by binding to a consensus sequence in Cas1 promoter. Nice ! https://www.biorxiv.org/content/10.1101/2020.01.31.929752v1 …pic.twitter.com/RZOY2I5RFP
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Franklin Nobrega proslijedio/la je Tweet
Phage diversity, genomics and phylogeny Dion, Oechslin and Moineau explore the diversity of phages at the structural, genomic and community levels as well as their complex evolutionary relationships. https://www.nature.com/articles/s41579-019-0311-5 …
@smoineau@moira_dionpic.twitter.com/pbi9dtd4nY
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Franklin Nobrega proslijedio/la je Tweet
Tracking microbial evolution in the human gut using Hi-C reveals extensive horizontal gene transfer, persistence and adaptationhttps://www.nature.com/articles/s41564-019-0625-0 …
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Franklin Nobrega proslijedio/la je Tweet
Engineering a DNAzyme-based Operon System for the Production of DNA Nanoscaffolds in Living Bacteriahttps://pubs.acs.org/doi/abs/10.1021/acssynbio.9b00415#.XjXAUt0DUfc.twitter …
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Franklin Nobrega proslijedio/la je Tweet
Super cool method for large-scale sequence-function relationships using molecular recorder (bxbI flipping mcherry) and measuring sequencing output over time. They use a new set of learning algorithms to explore sequence determinants of RBSs. https://www.biorxiv.org/content/10.1101/2020.01.23.915405v1.full.pdf …
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Franklin Nobrega proslijedio/la je Tweet
Postdoc position in St Andrews studying
#CRISPR and cyclic nucleotide signalling - available immediately. Such a lot to discover in this exciting field. RTs much appreciated https://tinyurl.com/us2hhyfHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Franklin Nobrega proslijedio/la je Tweet
Right then.... Posted our methods for HMW extraction, ligation library protocol modifications and bead-free methods for increasing 100Kb+ ultra-long reads on the
@nanopore community. https://community.nanoporetech.com/posts/rocky-mountain-adventures … Will also be pushing to@longreadclub and@protocolsIO soon enjoy
pic.twitter.com/Q4z2g2cfoM
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Franklin Nobrega proslijedio/la je Tweet
The proof is in the
#SMALP-ing! So happy to finally have my first, first author paper go live as part of the@smalpnet special issue in BBA this month. Ever wondered if you could swap SMALPs for amphipols or detergents? Then this might be worth a look!
https://doi.org/10.1016/j.bbamem.2020.183192 …pic.twitter.com/Z15yre4OL4
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Franklin Nobrega proslijedio/la je Tweet
#nCoV2019 genomes from China are accumulating a bit of genetic diversity (seen at https://nextstrain.org/ncov?c=location&f_country=China&m=div&p=grid&r=location …). This is expected given RNA virus error-prone replication and does not indicate functional differences. 1/3pic.twitter.com/9YgNP0teut
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Franklin Nobrega proslijedio/la je Tweet
Come work with
@an_salazan and me! We have a job opening for a microbiome bioinformatician at@sniprbiome in Denmark. Our goal is to engineer microbiomes using#CRISPR technology, to treat a number of serious and life-threatening diseases. Apply here: https://www.jobindex.dk/vis-job/h957951?lang=en …pic.twitter.com/FP8IW9BCmY
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Franklin Nobrega proslijedio/la je Tweet
Last from our lab with
@OlivierEspeli@CORNETFranois1 et al: partition systems favour inclusion of#plasmids in the nucleoid, which may have implications for the domestication of plasmids https://twitter.com/OlivierEspeli/status/1222199061958340608 …pic.twitter.com/lqLsp8Rgw5
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Franklin Nobrega proslijedio/la je Tweet
Finally out!! Check out our paper 'Gene gain and loss across the metazoan tree of life' by
@toni_gabaldon and yours truly just published in@NatureEcoEvo 1/nhttps://www.nature.com/articles/s41559-019-1069-x …Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Franklin Nobrega proslijedio/la je Tweet
Our educational guide for nanopore sequencing in the classroom is out in
@PLOSCompBiol. Introducing bioinformatics students to the realities of data acquisition, an educational collaboration of@StanBrouns at@TNWTUDelft and myself at@EEMCS_TUD.https://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1007314 …Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Franklin Nobrega proslijedio/la je Tweet
DeepVirFinder. The next obvious step in development of our k-mer based virus identification tool (VirFinder) is the implementation of
#deeplearning Available on github: https://github.com/jessieren/DeepVirFinder … Now if we could only get a bit more creative with naming of our tools.https://twitter.com/jessierenjie/status/1220923508835807232 …Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi
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