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As regards reversibility, they just train a forward network to map one way, and a reverse network (with very different shape) to map the other way. Not perfect reversibility, but they don't care; they discard the outputs that make no sense.
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One of the 50 properties is "this is a drug that does exactly what we want", so to have the end result be an almost identical chemical is unsurprising. The corollary of garbage in, garbage out: solved problem in, solved problem out.
End of conversation
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