calculate polygenic risk scores using #rstats #datatable for #largedata such as @uk_biobank http://sahirbhatnagar.com/polygenic-risk-scores …pic.twitter.com/QRSdu6NnQZ
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sorry for the change, had to migrate my site. See here http://sahirbhatnagar.com/blog/2017/polygenic_risk_scores/ …
I am wondering how well this scales for large datasets. Say, could one easily score 1000 genomes this way, or does one have to use PLINK? Would be nice with a PLINK wrapper for scoring large datasets (e.g. in VCF).