The Yale #SARSCoV2 Genome Surveillance Initiative released its 7th weekly update. This time we took advantage of phylogeography to gain some insight into how and where #COVID19 is spreading within #Connecticut
Full report • https://covidtrackerct.com/portfolio/update7/ …pic.twitter.com/J1UAJYOLCk
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Disclaimer: these results are preliminary, and some patterns of viral spread may change as more data are available.
→ In a few words: by using 117 #SARScov2 genomes from CT, we found sustained#COVID19 transmission, especially within/between Fairfield and New Haven counties.pic.twitter.com/sHMm9CC8WX
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Last month we revealed multiple introductions of
#SARSCoV2 from NY and from the West Coast (WA state) to Connecticut. Now we see viral spread among towns in CT, spanning form the western towns of Ridgefield and Easton, to Haddam, Westbrook, and the Greater New Haven area.pic.twitter.com/ibdkCgTRQY
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Surprisingly, using genomic data, we have not yet found evidence of interstate spread between CT and Massachusetts (MA), which would be detected if MA genomes are found interspersed among CT genomes (mint) all over the tree. In fact, MA genomes (pink) cluster mostly together.pic.twitter.com/O3v4m8WHp9
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Outbreaks are still unfolding in major urban centers, and most of the population in the US is still susceptible to the coronavirus. It's critical that we closely track the spread of the virus using genomic and epidemiological data to develop safe reopening strategies.
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To learn more how
#genomics have been used to track the spread of the virus causing#COVID19, check the blog post and the video below: Post: https://covidtrackerct.com/about-gen-epi/ Video: https://youtu.be/UTzUtW3qs7M#CoronaVirusUpdates1 antwoord 3 retweets 3 vind-ik-leuksDeze collectie tonen -
Interact with our preliminary results by accessing our
@nextstrain page: https://nextstrain.org/community/grubaughlab/CT-SARS-CoV-2/update7 …#Bioinformatics#Phylogeography1 antwoord 1 retweet 4 vind-ik-leuksDeze collectie tonen -
Shout out to all those involved in this project:
@MaryPetrone10,@awyllie13,@IsabelOtt,@VogelsChantal,@tdalpert,@JosephFauver,@28cole,@AndersonBrito_,@ChaneyKalinich,@PeterNeugebau12,@NathanGrubaugh,@YaleSPH,@YaleEMD#covid#coronavirus@covidCT#connecticut1 antwoord 2 retweets 11 vind-ik-leuksDeze collectie tonen -
Als antwoord op @CovidCT @MaryPetrone10 en
Such nice work here.
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Thanks
@trvrb
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I agree - this is great!
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