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As before, the proximity of these pangolin-associated SARS-like coronaviruses makes pangolins a plausible intermediate host for #COVID19, but this is not yet definitive. See https://nextstrain.org/groups/blab/sars-like-cov?c=host … for a whole genome phylogeny. 4/4
Given these sequences it actually seems *less* plausible to me that they could be intermediate. Possible, yes, but I don't think very plausible given the data.
I agree. If these are the supposedly 99% similar sequences everybody talks about, all this shows is that Pangolins have SARS-like Coronaviruses -- many other animals do too.
I think phylogenetic proximity is suggestive. A small sampling of pangolin viruses found two clades both quite close. Doesn't seem unreasonable to expect that more samples would find something closer still. And yes, definitely less plausible than going off the reported "99%".
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