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JavierMenRev's profile
Javier Mendoza-Revilla
Javier Mendoza-Revilla
Javier Mendoza-Revilla
@JavierMenRev

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Javier Mendoza-Revilla

@JavierMenRev

🇵🇪 Postdoctoral researcher with @QuintanaMurci at @institutpasteur. Interested in human population genetics and complex traits. Previously at @UGI_at_UCL.

Paris, France
Joined February 2013

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    Javier Mendoza-Revilla‏ @JavierMenRev Apr 16

    Huge meta-analysis of hair color in Europeans identifies 13 novel loci: Collectively, assoc SNPs explain 34.6% of red hair, 24.8% of blond hair, and 26.1% of black hair heritability. Hair (and skin and eye) pigmentation ARE complex polygenic traits https://www.nature.com/articles/s41588-018-0100-5 …pic.twitter.com/ILcCQ7dUNv

    12:38 PM - 16 Apr 2018
    • 70 Retweets
    • 140 Likes
    • Izabella Oberman Hideki Hugh Drumm David Eccles (Māo/32) Riley Murphy Syed Gertjan van Ommen Liisa Loog Holtz
    6 replies 70 retweets 140 likes
      1. New conversation
      2. Javier Mendoza-Revilla‏ @JavierMenRev Apr 17

        Table 2 (listing novel hits) seems to have a mistake. One of the hits is rs1426654 (SLC24A5), which is a well-known pigmentation variant.

        1 reply 1 retweet 0 likes
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      3. Javier Mendoza-Revilla‏ @JavierMenRev Apr 17

        Also, they report 111 novel variants, not 13...

        0 replies 0 retweets 1 like
        Show this thread
      4. End of conversation
      1. New conversation
      2. Cecile Janssens‏ @cecilejanssens Apr 16
        Replying to @JavierMenRev

        Just asking: why does each hair color have its own heritability? Do they have separate biological mechanisms?

        1 reply 0 retweets 0 likes
      3. Javier Mendoza-Revilla‏ @JavierMenRev Apr 16
        Replying to @cecilejanssens

        According to the authors: "... although hair pigmentation spans a spectrum from very bright (blond) to very dark (black), the genetic mechanisms do not always follow this linear scale, as red hair color often has unique predisposing genetic factors."

        0 replies 1 retweet 2 likes
      4. End of conversation
      1. New conversation
      2. Picolo Martin‏ @EnderRaptor Apr 17
        Replying to @JavierMenRev

        Thats all they can explain for hair color a minority of the variance? I thought the hair thing was already sorted.

        1 reply 0 retweets 0 likes
      3. Ralph Stadhouders‏ @R_Stadhouders Apr 19
        Replying to @EnderRaptor @JavierMenRev

        Same here 🤔

        0 replies 0 retweets 1 like
      4. End of conversation
      1. David Eccles (Māo/32)‏ @gringene_bio Apr 17
        Replying to @JavierMenRev @genetisaur

        I just looked at the Y axis of that plot again. It's a log-log plot: it has the *exponents* of the P values as a log scale.

        0 replies 0 retweets 0 likes
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      1. David Eccles (Māo/32)‏ @gringene_bio Apr 17
        Replying to @JavierMenRev

        Hmm... p-values indicating importance, reciprocal probabilities greater than the number of people on the planet (presumably because @23andMe), no discussion of the highest beta value from the "meta-analysis", and a single-population analysis. Nope, nothing wrong with that study.

        0 replies 0 retweets 0 likes
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      1. Raf D Barat‏ @rafdbarat Apr 16
        Replying to @JavierMenRev

        http://www.dhamurian.org.au/anthropology/neanderthal1.html …

        0 replies 0 retweets 0 likes
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