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Candice Hirsch proslijedio/la je Tweet
I thought it could be helpful to have a thread on ANOVA in R. As a statistical consultant, this is the most frequent FAQ I get from clients - how to run a linear model on their data, conduct hypothesis tests, extract predicted means and perform contrasts.
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Candice Hirsch proslijedio/la je Tweet
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@HirschCory from the U of MN gives us a briefing on his checkoff-funded research to improve detection of brown stem rot and sudden death syndrome using high-throughout phenotyping.pic.twitter.com/Zr8tK6L6xFHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Candice Hirsch proslijedio/la je Tweet
Thank you to
@NationalCorn board member Kenneth Hartman for making the drive up from@ilcorn to attend the MCGA Annual Meeting with fellow Corn Board members,@HaroldWolle and Tom Haag. Always a great opportunity to unite grower leaders from across the nation.pic.twitter.com/XGBkidG3Tt
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Candice Hirsch proslijedio/la je Tweet
Just interviewed
@sedlazeck and@MedhatHelmy7 on their SV review paper (for my@Medium blog) but we covered so much more ground incl. history of SV, tool dev, postdoc, population scaling...AHHHH why do I have more meetings today I just want to write NOW
https://genomebiology.biomedcentral.com/articles/10.1186/s13059-019-1828-7 …Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Candice Hirsch proslijedio/la je Tweet
New Fungal Biologist/Plant Pathologist position in the Dept. of Plant Pathology at the University of Minnesota has just been posted: https://hr.myu.umn.edu/jobs/ext/335094 - This is an exciting new position to study soil-borne fungal plant pathogens in an extraordinary department!pic.twitter.com/Hc5zgNU1f5
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Candice Hirsch proslijedio/la je Tweet
Pretty amazing result from the Dawe Lab and we enjoyed collaborating...telomere to telomere with no gaps for two chromosomes and 7/10 functional centromeres traversed without gaps. We also now know the structure of the Ab10 haplotype.https://twitter.com/corncolors/status/1217797345527631872 …
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Candice Hirsch proslijedio/la je Tweet
Merging two independent assemblies (one from PacBio and another Nanopore), guided by Bionano maps, yielded a dramatically improved assembly of an inbred carrying maize Abnormal chromosome 10. The contig N50 is 162 Mb, with two fully gapless chromosomes.https://www.biorxiv.org/content/10.1101/2020.01.14.906230v2 …
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Candice Hirsch proslijedio/la je Tweet
New paper on BioRxiv about circadian gene expression in cavefish! Excellent work, Katya! https://www.biorxiv.org/content/10.1101/2020.01.14.906628v1 …
@AlexCarlKeene@JohannaKowalko@NicolasRohner@MackKatya@cnpassow@james_jaggard@BA_StahlHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Candice Hirsch proslijedio/la je Tweet
Final message from Kevin Fengler on tackling large plant genomes: don’t be afraid, HiFi has your back.
#PAGXXVIIIpic.twitter.com/Ha6cdfuPfv
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Candice Hirsch proslijedio/la je Tweet
30x of long reads with N50 > 20kb is enough to capture the gene and TE space! More and longer reads are needed for telomeres, centromeres, and knobs.
#PAGXXVIII#PAG2020https://twitter.com/snodgrasshopper/status/1217211591390744576 …Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Candice Hirsch proslijedio/la je Tweet
Shout out to lab mate
@SigmaFacto for a great talk on benchmarking assembly methods: how much data do you really need to get quality gene/repeat space assembly?#PAGXXVIIIHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Candice Hirsch proslijedio/la je Tweet
#PAGXXVIII@corteva session: Doreen Ware on#NAMgenomes, one reference genome is not enough! Assembly has become lot easier over time, but annotation is still very hard. Evidence-based annotations released for NAMs have gone extensive vetting and is still a work in progress.Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Candice Hirsch proslijedio/la je Tweet
Samantha Snodgrass tests the complementation in maize heterosis with focus on PAV, SNPs, and regulatory elements. Tropical x tropical hybrids had higher heterosis than tropical x temperate, which is odd due to the lack of a complementary daylight insensitivity allele.
#PAG2020Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Candice Hirsch proslijedio/la je Tweet
I don't think Yongfu's sorghum pangenome assemblies/analysis are published yet, but references his recent Molecular Plant paper on how to employ pangenome data for plant breeding/improvement. https://doi.org/10.1016/j.molp.2018.12.016 …pic.twitter.com/K7onXJqJXr
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Candice Hirsch proslijedio/la je Tweet
Yongfu Tao: independent genome assemblies for 13 sorghum lines, including wild relative. Divides pan-genome into core (always present), cloud (observed only once), and shell (everything else) for downstream analyses. Smart classification scheme!
#PAGXXVIII@EmmaOmics@SorgGuyPrikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Candice Hirsch proslijedio/la je Tweet
#PAGXXVIII@corteva session:@mbhufford talks about ways to uncover novel variation in maize.#NAMGenomes provide tremendous diversity within maize lineage, but additional variation can be harnessed from diverse species of Andropogoneae (#PanAnd) clade, for crop improvement!Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Candice Hirsch proslijedio/la je TweetHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi
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Candice Hirsch proslijedio/la je Tweet
Kelly Dawe
@corncolors now speaking about chromosome level assemblies of 25 maize lines (all at once with the same tech and code). Comparative genomics approaches and questions we’d normally use BETWEEN species. Maize session at#PAGXXVIII https://nam-genomes.org/ pic.twitter.com/5uEDf1Bw0w
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Candice Hirsch proslijedio/la je Tweet
#PAGXXVIII#maize session@corncolors presenting high-quality#NAMgenomes study! He talked about evidence-based gene prediction, genome fractionation, pangenome analyses, SV analyses, GWAS using SV’s and more! And bonus, Ab10 genome as well! All genomes public at@MaizeGDB!Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi
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