"marge" a R interface for "HOMER". Identify those motifs you like dearly and parse them easily within R with your favorite motif caller. REALLY nice!https://twitter.com/tangming2005/status/1221877635942248449 …
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As @tangming2005 outlined in his tweet there's also https://github.com/slowkow/homerkit … to parse HOMER motifs output. Really handy. I quitted using HOMER a while ago notably because of the pain of parsing the outputs.
