Oliver Pybus

@EvolveDotZoo

Research in evolutionary biology and infectious disease from Oliver Pybus and colleagues and

Vrijeme pridruživanja: veljača 2015.

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  1. proslijedio/la je Tweet
    prije 22 sata

    Discovery of several thousand highly diverse circular DNA viruses well done Michael J Tisza and and their crew at NIH, a team effort including ,

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  2. proslijedio/la je Tweet
    3. velj

    Most of the modelers responding to nCoV are doing so pro bono. There is no funding for this work. Every outbreak they drop the work they are funded to do and volunteer their expertise to help us all to understand what is happening and how to respond. 1/

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  3. proslijedio/la je Tweet
    3. velj

    New paper with Kris Parag and out in ! () We add a flexible epochal sampling model to the BSP and show that if sampling times are informative we can at least double the precision! Our model (BESP) is available as a package

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  4. proslijedio/la je Tweet

    Updated the phylodynamic analysis to include some recent cases (including 2 from the UK).

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  5. proslijedio/la je Tweet
    31. sij

    Herculean effort by all keeping the dots appearing. Please get in touch if you have a couple of hours time to help out geocoding, entering and updating new cases.

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  6. proslijedio/la je Tweet
    31. sij

    How close are we to the 'phylodynamic threshold'? A simulation study

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  7. proslijedio/la je Tweet
    31. sij

    200 Oxford Nanopore sequencers have left UK for China, to support rapid, near-sample sequencing for outbreak surveillance. Read the full story here:

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  8. proslijedio/la je Tweet
    Odgovor korisniku/ci

    And also the NextStrain time tree is resolving these later strains as grouping together but only because they have later dates. The non-clock tree shows a different pattern:

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  9. 30. sij

    Thanks, yes, that gives quite a different impression. Very important to compare closely both trees at the moment.

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  10. 30. sij

    Does this suggest that Guangdong has become a secondary focus of export? I can’t make up my mind.

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  11. proslijedio/la je Tweet
    29. sij

    Phylodynamic analysis of nCoV-2019 genomes – 29-Jan-2020

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  12. proslijedio/la je Tweet
    Odgovor korisnicima i sljedećem broju korisnika:
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  13. proslijedio/la je Tweet
    29. sij

    CADDE project training scientists from reference Institute Adolfo Lutz in metagenomic approaches () to rapidly identify new viruses in Brazil => critical for outbreak preparedness with

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  14. proslijedio/la je Tweet
    28. sij

    Big effort and push for new line list update. Please all acknowledge amazing work of round the clock curators

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  15. 27. sij

    A huge step forward 👏👏👏 Just the simple nudge of 'encouraging' potential NEJM authors to share data and use preprints could shift incentives radically.

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  16. proslijedio/la je Tweet
    27. sij
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  17. proslijedio/la je Tweet
    27. sij

    The 25th International Bioinformatics Workshop on Virus Evolution and Molecular Epidemiology (VEME) will take place in Rio de Janeiro, Brazil, from Sunday July 19 - Friday July 24, 2020. Application deadline: March 23.

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  18. proslijedio/la je Tweet
    25. sij

    Github repository now live with updated linelist with geographic location. Massive thanks to all contributors across many institutions. We will keep uploading basic epidemiological summaries spatially resolved:

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  19. proslijedio/la je Tweet
    25. sij

    Worth a moment to think about the health care professionals and residents in Wuhan. They are taking unprecedented measures that protect us as well as them.

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  20. proslijedio/la je Tweet
    24. sij

    My comments on the 2019-nCoV Wuhan coronavirus @CoronvirusOutbreak in media are compiled on my lab website: Also shoutout to great work from and colleagues:

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