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Oliver Pybus proslijedio/la je Tweet
Discovery of several thousand highly diverse circular DNA viruses https://doi.org/10.7554/eLife.51971 … well done Michael J Tisza and
@ChrisB_Buck and their crew at NIH, a team effort including@Lab_Sullivan@Varsani_lab,@AncaGeneHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Oliver Pybus proslijedio/la je Tweet
Most of the modelers responding to nCoV are doing so pro bono. There is no funding for this work. Every outbreak they drop the work they are funded to do and volunteer their expertise to help us all to understand what is happening and how to respond. 1/
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Oliver Pybus proslijedio/la je Tweet
New paper with Kris Parag and
@EvolveDotZoo out in@MolBioEvol! (https://doi.org/10.1093/molbev/msaa016 …) We add a flexible epochal sampling model to the BSP and show that if sampling times are informative we can at least double the precision! Our model (BESP) is available as a#BEAST2 packageHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Oliver Pybus proslijedio/la je Tweet
Updated the phylodynamic analysis to include some recent cases (including 2 from the UK).http://virological.org/t/phylodynamic-analysis-51-genomes-03-feb-2020/356 …
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Oliver Pybus proslijedio/la je Tweet
Herculean effort by all keeping the dots appearing. Please get in touch if you have a couple of hours time to help out geocoding, entering and updating new cases.pic.twitter.com/BjaOqAWW8Q
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Oliver Pybus proslijedio/la je Tweet
How close are we to the 'phylodynamic threshold'? A simulation studyhttps://ift.tt/2OgfJe6
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Oliver Pybus proslijedio/la je Tweet
200 Oxford Nanopore sequencers have left UK for China, to support rapid, near-sample
#coronavirus sequencing for outbreak surveillance. Read the full story here: http://bit.ly/2uOGWOj#nCoV19pic.twitter.com/bKfBQ8Th0D
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Oliver Pybus proslijedio/la je Tweet
And also the NextStrain time tree is resolving these later strains as grouping together but only because they have later dates. The non-clock tree shows a different pattern:pic.twitter.com/7JJfFCm3Mv
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Thanks, yes, that gives quite a different impression. Very important to compare closely both trees at the moment.https://twitter.com/arambaut/status/1222877346761449474 …
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Does this suggest that Guangdong has become a secondary focus of export? I can’t make up my mind.https://twitter.com/nextstrain/status/1222555078562734085 …
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Oliver Pybus proslijedio/la je Tweet
Phylodynamic analysis of nCoV-2019 genomes – 29-Jan-2020https://ift.tt/2t44jCW
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Oliver Pybus proslijedio/la je Tweet
Line list is posted here: https://docs.google.com/spreadsheets/d/1itaohdPiAeniCXNlntNztZ_oRvjh0HsGuJXUJWET008/edit?usp=sharing … and shout out to all the curators involved
@MOUGK@Sumiko_Mekaru@B_Gutierrez_G@BoXu55686629@davidmpigott@svscarpino@kara_sewalk and many moreHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Oliver Pybus proslijedio/la je Tweet
CADDE project training scientists from reference Institute Adolfo Lutz in metagenomic approaches (https://www.caddecentre.org/protocols/ ) to rapidly identify new viruses in Brazil => critical for outbreak preparedness
@imtspusp with@spsaude_@governosp@AgenciaFAPESP@The_MRCpic.twitter.com/V6EXCBuFGP
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Oliver Pybus proslijedio/la je Tweet
Big effort and push for new line list update. Please all acknowledge amazing work of round the clock curators
@UniofOxford@Harvard@Tsinghua_Uni@healthmap@IHME_UW https://docs.google.com/spreadsheets/d/1itaohdPiAeniCXNlntNztZ_oRvjh0HsGuJXUJWET008/edit?usp=sharing …@ScientificDataPrikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
A huge step forward


Just the simple nudge of 'encouraging' potential NEJM authors to share data and use preprints could shift incentives radically.https://twitter.com/NEJM/status/1221922077843894272 …Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Oliver Pybus proslijedio/la je TweetHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi
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Oliver Pybus proslijedio/la je Tweet
The 25th International Bioinformatics Workshop on Virus Evolution and Molecular Epidemiology (VEME) will take place in Rio de Janeiro, Brazil, from Sunday July 19 - Friday July 24, 2020. Application deadline: March 23. https://rega.kuleuven.be/cev/veme-workshop/2020 …
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Oliver Pybus proslijedio/la je Tweet
Github repository now live with updated linelist with geographic location. https://github.com/beoutbreakprepared/nCoV2019 … Massive thanks to all contributors across many institutions. We will keep uploading basic epidemiological summaries spatially resolved:http://virological.org/t/epidemiological-data-from-the-ncov-2019-outbreak-early-descriptions-from-publicly-available-data/337/3 …
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Oliver Pybus proslijedio/la je Tweet
Worth a moment to think about the health care professionals and residents in Wuhan. They are taking unprecedented measures that protect us as well as them.https://twitter.com/caixin/status/1220902262630838272 …
0:37Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Oliver Pybus proslijedio/la je Tweet
My comments on the 2019-nCoV Wuhan coronavirus @CoronvirusOutbreak in media are compiled on my lab website: https://chiulab.ucsf.edu Also shoutout to great work from
@MOUGK and colleagues:http://virological.org/t/epidemiological-data-from-the-ncov-2019-outbreak-early-descriptions-from-publicly-available-data/337 …Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi
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