Ethan C. Alley

@EthanAlley

Into protein design and biosecurity. Sriracha evangelist. with

Vrijeme pridruživanja: ožujak 2019.

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  1. Prikvačeni tweet
    24. sij

    Our new paper! My favorite bits were: - Discovering WAY more functional proteins out there (1000+!!) then previously explored by evolution OR decades of engineering - Connecting engineering and tech-translation failures with Goodhart's law - 's first thread :P

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  2. proslijedio/la je Tweet
    31. sij

    What are the best solns for high level to low level performant creation of RNN/LSTM layers? - Reason: seem unlikely to release new cuDNN RNNs (i.e. LayerNorm LSTM) - The JIT looked promising but JIT LSTM had many problems for me - JAX? TF? Back to CUDA?

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  3. proslijedio/la je Tweet
    30. sij

    1/ Did you know that Vannevar Bush (you know, the guy who helped enable everything from radar to the manhattan project, the NSF to memexes) wrote an autobiography? Turns out that yes he did, it's been out of print since the 70's, and it's *excellent* BOOK REPORT THREAD

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  4. proslijedio/la je Tweet
    29. sij

    LOL sometimes I think the Biological Weapons Convention should have more funding than an average McDonald's. From:

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  5. 28. sij

    Can't wait for my turn to name something...

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  6. proslijedio/la je Tweet
    28. sij

    In DC for , so much cool work here in rapid countermeasure response for new pathogens! If you are working on this, I want to talk - dms open.

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  7. proslijedio/la je Tweet
    26. sij

    Want to watch 6 disinfo operations unfold in 6 minutes? Thanks to a Open Source Support grant, I’ve done just that with network visualization and documented some interesting patterns on Medium 1/

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  8. proslijedio/la je Tweet
    26. sij

    I present Love Thy Nearest Neighbor: a Markov chain generator trained on the King James Bible and Kevin Murphy’s Machine Learning: A Probabilistic Perspective. Behold...

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  9. proslijedio/la je Tweet
    24. sij

    This has been a really fun one! challenging the wisdom that one needs a lot of data to do ML guided biodesign. In fact, if you have to choose, think about getting HQ small-N data aligned w your endpoint, vs HT proxy data. low-N ML now helps you succeed w the former!

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  10. proslijedio/la je Tweet
    24. sij

    ‘Eat local’ is common advice for a low-carbon diet. But this has little impact on your carbon footprint. Transport accounts for only 6% of food emissions. Focus instead on *what* you eat. Food choices > food miles. Latest article:

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  11. proslijedio/la je Tweet
    22. sij

    Visiting the island of Socotra in Yemen can seem like you’re on another planet. 307 out of the 825 or 37% of the plant species found on the island (including the dragon blood tree that bleeds bright red sap when it’s cut) isn’t found anywhere else on Earth

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  12. proslijedio/la je Tweet
    20. sij

    You’re not seeing what you think you’re seeing...just FYI. EVOLUTION IS NUTS. That is the tip of the viper’s tail. It’s the lure of the Iranian spider-tailed viper!!!

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  13. proslijedio/la je Tweet
    21. sij

    When you burn steel wool, it gets heavier! While burning, the steel wool oxidizes to form iron oxide: 2Fe + 3O₂ → 2Fe₂O₃

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  14. 21. sij
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  15. proslijedio/la je Tweet
    17. sij

    Publishing in in 2020 vs in 1996- a case tweet: For a class, I read the original Smad4 paper by , published in 1996 That same week, the same lab published in the same journal on the same pathway- what was different? (Besides the font!)

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  16. proslijedio/la je Tweet
    18. sij

    Awesome interactive demos of different MCMC algorithms:

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  17. proslijedio/la je Tweet
    18. sij

    This is a video of GPS tracking of multiple wolves in six different packs around Voyageurs National Park, Minnesota, which shows how much the wolf packs avoid each other's range [source: ] [video: ]

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  18. proslijedio/la je Tweet

    This is hilarious. A Norwegian TV programme pitted some professional stock-pickers against an astrologist, some beauty bloggers and - i kid you not - cows shitting in a field. (short thread).

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  19. proslijedio/la je Tweet
    12. sij

    Super happy to present recent work with & Jim Collins, building a deep learning-based language model for the last remaining biopolymer after DNA, RNA, and proteins: 1/4

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  20. proslijedio/la je Tweet
    13. sij

    AWS accidentally sent me their email newsletter template, and it's kinda great. cc ;)

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