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Are you looking for recommendations of tools in scRNA-seq ? Then our preprint is for you! First collaboration within
@markrobinsonca 's group. Props to PL Germain for the idea and the implementation of 'pipeComp'.https://twitter.com/biorxivpreprint/status/1224094330496987143 …Hvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Anthony Sonrel proslijedio/la je Tweet
OK, my current list is 31 scRNA-seq (analysis method) benchmarks: https://docs.google.com/spreadsheets/d/1Gqn0eZ8oiNh8-9ovyh4D_ZsoWcKYoKTJ0C1AfrJrdRA/edit?usp=sharing … I consolidated
@seandavis12's@_lazappi_'s@JMA_Data's and went through the@GenomeBiology benchmark issue. Any others I missed?https://twitter.com/markrobinsonca/status/1220048175320440832 …Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Anthony Sonrel proslijedio/la je Tweet
My first paper since joining the
@ryanlisterlab presents a tool - schex - that can avoid overplotting in dimension reduction plots of single cell data. For example, schex allows accurate plotting of the expression of CD4 of over 6,000 cells. https://tinyurl.com/tftu636 1/npic.twitter.com/F0RWy8WaDv
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Anthony Sonrel proslijedio/la je Tweet
TWEETORIAL: PHATE, our dimensionality reduction and
#dataviz method featured on the cover of today’s@NatureBiotech! To help spread the word,@scottgigante and@dbburkhardt put together this#tweetorial for you. https://www.nature.com/articles/s41587-019-0336-3 … (1/10)https://twitter.com/NatureBiotech/status/1201929959490670593 …
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Anthony Sonrel proslijedio/la je Tweet
Evaluation of Cell Type Deconvolution R Packages on Single Cell RNA-seq Data http://biorxiv.org/cgi/content/short/827139v1 …
#biorxiv_bioinfoHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Anthony Sonrel proslijedio/la je Tweet
Whenever you find yourself saying something like this, please redo your slides! - this is quite busy, the important point is [searching] - you probably can't read this, but - I just want you to focus on this one small panel here - not sure if you can distinguish the colors
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Anthony Sonrel proslijedio/la je Tweet
An elastic-net logistic regression approach to generate classifiers and gene signatures for types of immune cells and T helper cell subsets. http://dlvr.it/RGGZMW
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Anthony Sonrel proslijedio/la je Tweet
High-throughput sequencing of the transcriptome and chromatin accessibility in the same cell https://go.nature.com/32fyZ0h pic.twitter.com/k303XP9dng
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Anthony Sonrel proslijedio/la je Tweet
I can't remember where I first saw it, but still useful mnemonic (with an exaggerated eastern European accent): tar czf: "compress zee file" tar xzf: "xtract zee file"
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Anthony Sonrel proslijedio/la je Tweet
Gene set inference from single-cell sequencing data using a hybrid of matrix factorization and variational autoencoders http://biorxiv.org/cgi/content/short/740415v1 …
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Anthony Sonrel proslijedio/la je Tweet
Excited to see this out! https://peerj.com/preprints/27885/ … Major props to
@DLaehnemann@johanneskoester! This is the product from such a cool#SingleCell workshop@lorentzcenter http://lorentzcenter.nl/lc/web/2018/986/info.php3?wsid=986&venue=Oort … led by@johanneskoester Alice McHardy@benjraphael Alexander Schönhuth@SohrabShahHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Anthony Sonrel proslijedio/la je TweetHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi
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Anthony Sonrel proslijedio/la je Tweet
Composé de scientifiques, journalistes et citoyen·ne·s concerné·e·s, le collectif
@nofake_science vise à alerter sur le traitement médiatique actuel de l'information scientifique afin que cessent les dérives sensationnalistes et idéologiques dangereuses.Prikaži ovu nitHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi -
Anthony Sonrel proslijedio/la je Tweet
Let’s play a little game. Let’s say that you’re the CSO at a cancer pharma company, and you have to choose a target to go after. Here’s a gene – high expression is associated with poor prognosis in brain cancer. Looks like a good candidate for an inhibitor right?pic.twitter.com/5J7fKOWh6c
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Anthony Sonrel proslijedio/la je Tweet
Logical fallacies: A cheat sheet Full high res version http://www.obsidianfields.com/lj/venn-poster4-large.jpg …pic.twitter.com/rMnMuUC5p6
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Anthony Sonrel proslijedio/la je Tweet
We're pleased to announce the official release of
@rstudio 1.1! More info & downloads: https://blog.rstudio.com/2017/10/09/rstudio-v1.1-released/ …#rstatspic.twitter.com/lzO6sMCGFj
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Anthony Sonrel proslijedio/la je Tweet
Alternative medicine as sole treatment was associated with higher risk of death. Kind of sad that this is such an important study, in 2017.pic.twitter.com/3sMhS5Bfay
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Anthony Sonrel proslijedio/la je Tweet
RStudio v1.1 Preview - I Only Work in Black: https://blog.rstudio.com/2017/08/30/rstudio-dark-theme/ …
#rstatsHvala. Twitter će to iskoristiti za poboljšanje vaše vremenske crte. PoništiPoništi
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