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AndrewGYork's profile
Andrew York
Andrew York
Andrew York
@AndrewGYork

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Andrew York

@AndrewGYork

I'm a physicist; I develop new microscopy techniques.

San Francisco, CA
andrewgyork.github.io
Joined November 2017

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    1. Andrew York‏ @AndrewGYork 19 Feb 2018

      Re-imagine scientific publishing. What would you change? My answer: No paywall, no delay, straight to the web. Open data, open code, interactive/animated figures. Transparent, rolling peer review, version control, CCBY license, citable DOIs. See it here: https://andrewgyork.github.io/ 

      50 replies 456 retweets 1,248 likes
      Show this thread
    2. Angel Lopez-Urrutia‏ @LopezUrrutiaA 10 Nov 2018
      Replying to @AndrewGYork

      How do you get a measure of the impact of your research?

      2 replies 0 retweets 1 like
    3. Andrew York‏ @AndrewGYork 11 Nov 2018
      Replying to @LopezUrrutiaA

      This is a really excellent question. The short answer is, the same way I did with traditional journals. The Google analytics JavaScript gives me a way to count page views: https://github.com/AndrewGYork/rescan_line_sted/tree/master/javascript/google-analytics … The GitHub/Zenodo integration gives me a citable DOI:https://doi.org/10.5281/zenodo.591251 …

      2 replies 0 retweets 2 likes
    4. Andrew York‏ @AndrewGYork 11 Nov 2018
      Replying to @AndrewGYork @LopezUrrutiaA

      But the real answer is longer, and more specific to me. I invent and build new kinds of microscopes. My personal definition of impact is when people build or use my inventions. That takes a while! But usually the people doing so contact me, and often we work together.

      1 reply 0 retweets 5 likes
    5. Andrew York‏ @AndrewGYork 11 Nov 2018
      Replying to @AndrewGYork @LopezUrrutiaA

      Andrew York Retweeted Ricardo Henriques

      My postdoc work has had time to turn into commercial products. A few recent examples:https://mobile.twitter.com/HenriquesLab/status/1023619153050198018 …

      Andrew York added,

      Ricardo Henriques @HenriquesLab
      The new Yorkogawa is out 😊😉. Great to see variations on @AndrewGYork work. https://twitter.com/Yokogawa_LS/status/1022742199769784320 …
      1 reply 0 retweets 1 like
    6. Andrew York‏ @AndrewGYork 11 Nov 2018
      Replying to @AndrewGYork @LopezUrrutiaA

      Andrew York Retweeted Super Res Man

      https://mobile.twitter.com/superresman/status/1017869618340352000 …

      Andrew York added,

      Super Res Man @superresman
      wow. the rumors are true: the nanoimager does SIM ! 😍 guess which one is wide-field and SIM. (this is tom20 & tubulin in cos7). pic.twitter.com/dMqs77JmIa
      Show this thread
      1 reply 0 retweets 2 likes
    7. Andrew York‏ @AndrewGYork 11 Nov 2018
      Replying to @AndrewGYork @LopezUrrutiaA

      Andrew York Retweeted CDB Microscopy Core

      https://mobile.twitter.com/CDBMicroCore/status/1043277265876996096 …

      Andrew York added,

      CDB Microscopy Core @CDBMicroCore
      We haven't had much sun in Philly lately. Fortunately @aaandmoore left behind a treasure-trove of data on our @VisiTech_UK VT-iSIM, so I was able to create a little sunshine from one of his data sets. Actin in orange-hot, mitos in green - thanks Andy! #FunwithLUTs pic.twitter.com/1p5kwKLtr7
      2 replies 0 retweets 1 like
    8. Andrew York‏ @AndrewGYork 11 Nov 2018
      Replying to @AndrewGYork @LopezUrrutiaA

      My GitHub publications are still too recent for this type of result. I know of three labs who I believe will publish work that builds on them in the next few years, but I think it would be premature to name them.

      1 reply 0 retweets 1 like
      Andrew York‏ @AndrewGYork 11 Nov 2018
      Replying to @AndrewGYork @LopezUrrutiaA

      However, I can point to my favorite example: the #miCube! https://hohlbeinlab.github.io/miCube/index.html … I didn't contribute to the microscope in any technical or intellectual way, at all. But, the @HohlbeinLab based their page on my GitHub template: https://andrewgyork.github.io/publication_template/ … And made it better!

      8:49 AM - 11 Nov 2018
      • 4 Likes
      • Melissa Glidewell Paul Reynolds Ricardo Henriques Johannes Hohlbein
      1 reply 0 retweets 4 likes
        1. New conversation
        2. Andrew York‏ @AndrewGYork 11 Nov 2018
          Replying to @AndrewGYork @LopezUrrutiaA @HohlbeinLab

          Like, a lot better. Their parts list, for example, is really awesome: https://hohlbeinlab.github.io/miCube/component_table.html …

          2 replies 0 retweets 3 likes
        3. Andrew York‏ @AndrewGYork 11 Nov 2018
          Replying to @AndrewGYork @LopezUrrutiaA @HohlbeinLab

          Their exploded view of their microscope is pretty cool too: https://hohlbeinlab.github.io/miCube/index.html#Figure_exploded …

          1 reply 0 retweets 1 like
        4. Andrew York‏ @AndrewGYork 11 Nov 2018
          Replying to @AndrewGYork @LopezUrrutiaA @HohlbeinLab

          And since they were kind enough to mention my template, I could feel proud to have been a (very small) part of their awesome work.

          0 replies 0 retweets 1 like
        5. End of conversation

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