4DN DCIC

@4dn_dcic

Data coordination and integration center for the 4D Nucleome Project. Currently hiring! See pinned tweet for info and link.

Boston, MA
data.4dnucleome.org
Vrijeme pridruživanja: studeni 2016.
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  1. Prikvačeni tweet
    3. ruj 2019.

    The 4DN DCIC is hiring engineers, data curators, and bioinformatics scientists! Please RT! More info here:

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  2. proslijedio/la je Tweet
    prije 23 sata

    Its time to prepare for the four RFAs for Phase 2 of the 4D Nucleome Project! Topics include Chromatin Dynamics and Function, Data Integration, Modeling, and Visualization, and Human Health and Disease. Special RFA for New Investigator Projects!

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  3. prije 21 sat

    We've released our first pA-DamID experiments ( 49 sets from ) on the 4DN data portal:

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  4. proslijedio/la je Tweet
    23. sij

    2020 Keystone Symposium: Higher-Order Chromatin Architecture in Time and Space. Date: March 15 - 19, 2020 Location: Whistler Conference Centre, Whistler, BC, Canada Scientific Organizers: Jennifer E. Phillips-Cremins, Job Dekker and Stavros Lomvardas

    8 proslijeđenih tweetova 11 korisnika označava da im se sviđa
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  5. proslijedio/la je Tweet
    2. sij

    Pre-Application Webinar for the 4D Nucleome () program - January 21st from 1:00PM-3:00PM. NIH staff will discuss the overall structure and goals of stage 2 of the 4DN program and specific FOAs, then answer questions from prospective applicants.

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  6. 8. pro 2019.

    Corrected link here:

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  7. proslijedio/la je Tweet
    6. pro 2019.

    Checkout the new funding opportunities for phase 2. With a focus on genome dynamics and understanding mechanisms and role or genome organization in health and disease.

    Phase II of the program to study 3D organization of the nucleus in space and time has launched. Visit to read the 4 new RFAs! Datasets, software, protocols, & reagents from Phase I are publicly available at .
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  8. 6. pro 2019.

    We're inspired by all the great talks at the annual meeting this year & excited for phase 2! Reach out to us at support@4dnucleome.org to submit your recent data!

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  9. proslijedio/la je Tweet
    6. pro 2019.

    HiPiler v1.4 is out 🥳 I finally added support for modern Cooler files (>v0.8) thanks to , custom gene annotations, and updated to v1.7! Also, huge thanks to for reporting issues and testing.

    1 reply 12 proslijeđenih tweetova 34 korisnika označavaju da im se sviđa
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  10. proslijedio/la je Tweet
    4. pro 2019.

    Ever wonder how scientists map where our DNA is within our nucleus? Then check out the research from investigator of who aims to develop new technologies to better understand genomic architecture. Dr. Pombo's spotlight

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  11. 4. pro 2019.

    In preparation for the 4DN Annual Meeting, over the past month we have released 373 sequencing and microscopy experiment sets, comprising 13 assay types. Browse them all here:

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  12. proslijedio/la je Tweet
    25. stu 2019.

    4D NUCLEOME PHASE 2 Four new 4DN RFAs (Phase 2) have just been published earlier today. The announcement can be seen on the NIH Common Fund Website ().

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  13. 4. pro 2019.

    Excited to be in DC for the 4DN annual meeting! Look for Burak or one of the DCIC curators if you have questions about the data portal. Demo tomorrow at 1:25!

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  14. 8. stu 2019.

    Micro-C data make up some of the deepest datasets in the 4DN data portal. View interactive displays comparing Micro-C and Hi-C from Krietenstein et al (2019) here:

    3 proslijeđena tweeta 9 korisnika označava da im se sviđa
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  15. 7. stu 2019.

    We will be giving a data portal workshop/demo at the 4DN-ASCB satellite meeting on 12/5. If there are any specific topics or questions you want us to cover let us know! Reply, send a DM, or email us at support@4dnucleome.org

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  16. proslijedio/la je Tweet
    4. stu 2019.

    Our paper of how cells interconvert mitotic chromosomes into interphase nuclei is out today: Also check out the nice News&Views by Liu and De Wit

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  17. 6. stu 2019.

    Datasets first published in "Compartment-dependent chromatin interaction dynamics revealed by liquid chromatin Hi-C" on

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  18. 6. stu 2019.

    Liquefied Chromatin Hi-C datasets from and the are now released on the 4DN data portal:

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  19. 15. lis 2019.

    Deadline to register is TONIGHT!

    The - Meeting will be held on Dec 5 & 6 in DC. This meeting will feature recent technological and conceptual advances in studying higher order chromatin organization in eukaryotic cells. More info & registration can be found here:
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  20. 11. ruj 2019.

    Relevant Hi-C datasets publicly available on the 4DN data portal:

    Our latest paper compares chromatin confirmation using in situ Hi-C after a short duration of heat stress. Led jointly by Judhajeet Ray and
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  21. 3. ruj 2019.

    Learn about how we at the 4DN DCIC utilize open and reproducible cloud-based data processing!

    A new 4D Nucleome Scientific Webinar video has been released on the 4DN Youtube Channel: Reproducible Data Processing at the 4DN Data Coordination and Integration Center. Find it here:
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